BQ623709

Overview
NameBQ623709
Unique NameBQ623709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_MASLA (Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.825e-30
Identity = 67/98 (68.37%), Postives = 75/98 (76.53%), Query Frame = 2
Query:  146 MATYKVKLITP-EG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            MATYKV LI   EG  + IE PDD YILDAAE+AGIDLPYSCRAG+CSTCAGK            FL+DDQI+AGYVLTCVAYPTSD  +ETHK+EE+
Sbjct:    1 MATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.383e-30
Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 2
Query:  155 YKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEMS 436
            +KVKL+TP+G +E ECPDD YILD AE+ GI+LPYSCRAGSCS+CAGK            FL+D+QI+ G+VLTC AYP SDV +ETHK+EE++
Sbjct:    2 FKVKLLTPDGPKEFECPDDVYILDQAEELGIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEELT 95          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.383e-30
Identity = 68/143 (47.55%), Postives = 91/143 (63.64%), Query Frame = 2
Query:    8 ALSSAMVSTSFVRNKPTVTSLKAMPNMGQALFGLKANNNRGGRVIAMATYKVKLITPEG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            A+  +  +   + NK    S+ +   + ++ FGLK + N GG  ++ A YKVKL+ P+G E E E  DD YILDAAE+AG+DLPYSCRAG+CSTCAG+            FLED  ++ GYVLTCVAYP SD  + THK+ E+
Sbjct:   14 AVLRSQTTNKLITNKSYNLSVGSTKRVSRS-FGLKCSANSGGATMS-AVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_SPIMA (Ferredoxin OS=Spirulina maxima PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.065e-30
Identity = 65/96 (67.71%), Postives = 76/96 (79.17%), Query Frame = 2
Query:  146 MATYKVKLITP-EGEQE-IECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDE 427
            MATYKV LI+  EG  E I+C DDTYILDAAE+AG+DLPYSCRAG+CSTCAGK            FL+DDQI+AGYVLTCVAYPTSD T++TH++E
Sbjct:    1 MATYKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEE 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_SOLLS (Ferredoxin OS=Solanum lasiocarpum PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.935e-30
Identity = 60/95 (63.16%), Postives = 71/95 (74.74%), Query Frame = 2
Query:  149 ATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            A+YKVKLITP+G  E  CPDD YILD AE+ G DLPYSCRAG+CS+CAGK            FL+DDQI  G+VLTCVAYP S+VT+ETHK+E +
Sbjct:    1 ASYKVKLITPDGPIEFNCPDDVYILDRAEEEGHDLPYSCRAGACSSCAGKIVDGSVDQSDNSFLDDDQIGGGFVLTCVAYPKSNVTIETHKEEAL 95          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_APHSA (Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.183e-29
Identity = 59/96 (61.46%), Postives = 70/96 (72.92%), Query Frame = 2
Query:  146 MATYKVKLITPEGEQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            MA+YKV L TP+G+  I  PDD YILD AE+ G+DLPYSCRAG+CSTCAGK            FL+DDQI AGY+LTCVAYPT D  +ETHK+E +
Sbjct:    1 MASYKVTLKTPDGDNVITVPDDEYILDVAEEEGLDLPYSCRAGACSTCAGKLVSGPAPDEDQSFLDDDQIQAGYILTCVAYPTGDCVIETHKEEAL 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_SPIPL (Ferredoxin OS=Spirulina platensis PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.442e-29
Identity = 64/96 (66.67%), Postives = 74/96 (77.08%), Query Frame = 2
Query:  146 MATYKVKLITP-EGEQE-IECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDE 427
            MATYKV LI   EG  E I+C DDTYILDAAE+AG+DLPYSCRAG+CSTCAG             FL+DDQI+AGYVLTCVAYPTSD T++TH++E
Sbjct:    1 MATYKVTLINEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGTITSGTIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIKTHQEE 96          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER_NOSMU (Ferredoxin OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29
Identity = 63/98 (64.29%), Postives = 75/98 (76.53%), Query Frame = 2
Query:  146 MATYKVKLITP-EG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            MAT+KV LI   EG + EIE PDD YILDAAE+ G DLP+SCRAG+CSTCAGK            FL+DDQI+AGYVLTCVAYPTSDV ++THK+E++
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEEGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER1_ANASP (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=petF PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29
Identity = 63/98 (64.29%), Postives = 75/98 (76.53%), Query Frame = 2
Query:  146 MATYKVKLITP-EG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            MAT+KV LI   EG + EIE PDD YILDAAE+ G DLP+SCRAG+CSTCAGK            FL+DDQI+AGYVLTCVAYPTSDV ++THK+E++
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Match: FER1_ANASO (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=petF PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.870e-29
Identity = 63/98 (64.29%), Postives = 75/98 (76.53%), Query Frame = 2
Query:  146 MATYKVKLITP-EG-EQEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKXXXXXXXXXXXXFLEDDQIDAGYVLTCVAYPTSDVTVETHKDEEM 433
            MAT+KV LI   EG + EIE PDD YILDAAE+ G DLP+SCRAG+CSTCAGK            FL+DDQI+AGYVLTCVAYPTSDV ++THK+E++
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEEDL 98          
The following BLAST results are available for this feature:
BLAST of BQ623709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_MASLA1.825e-3068.37Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1... [more]
FER_LEUGL2.383e-3061.70Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]
FER3_ARATH2.383e-3047.55Ferredoxin-3, chloroplastic OS=Arabidopsis thalian... [more]
FER_SPIMA4.065e-3067.71Ferredoxin OS=Spirulina maxima PE=1 SV=2[more]
FER_SOLLS6.935e-3063.16Ferredoxin OS=Solanum lasiocarpum PE=1 SV=1[more]
FER_APHSA1.183e-2961.46Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2[more]
FER_SPIPL3.442e-2966.67Ferredoxin OS=Spirulina platensis PE=1 SV=2[more]
FER_NOSMU5.870e-2964.29Ferredoxin OS=Nostoc muscorum PE=1 SV=2[more]
FER1_ANASP5.870e-2964.29Ferredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=... [more]
FER1_ANASO5.870e-2964.29Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00800 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00800 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623709 ID=BQ623709; Name=BQ623709; organism=Citrus sinensis; type=EST; length=645bp
AATGGCCGCGCTCTCAAGCGCCATGGTCAGCACCTCATTCGTCAGAAACA
AGCCAACAGTGACAAGCCTCAAGGCCATGCCCAACATGGGTCAGGCTTTG
TTTGGCCTTAAAGCCAACAACAACAGAGGTGGACGTGTAATAGCCATGGC
TACATACAAAGTCAAGCTCATTACACCCGAGGGAGAGCAAGAAATTGAGT
GTCCTGATGACACATATATTCTTGATGCAGCTGAAGATGCTGGAATTGAT
CTCCCATATTCATGCAGGGCTGGTTCTTGCTCTACTTGTGCTGGGAAAGT
TGTCTCAGGTAGTGTTGACCAGTCAGATGGAAGCTTTCTTGAGGATGATC
AAATAGATGCAGGTTATGTTCTCACTTGTGTTGCTTATCCTACAAGTGAT
GTTACTGTTGAGACACACAAGGATGAAGAAATGTCTTAATTATGCGGCGC
TTTAATATAACATGGAGAATCTTGATATTATTATTATTAATATTGTGTCT
GGTTTGGTAATTTAGTGCCTTGTAAGGGGAATGTTGAAATATTGACGTGC
TTTCTTGAATGAGTAATATGAAAAGGGGGATTTTGCTCTGTACTTCCATT
TGCTGTCACAAATGAAGTCGCTGGAGCTTTACAATAATAAAGATA
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