BQ623715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD3E_ARATH (Omega-3 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD3 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 4.841e-87 Identity = 126/176 (71.59%), Postives = 145/176 (82.39%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 PLYWAAQGT+FWA+FVLGHDCGHGSFS+ LNSVVGH+LHS ILVPYHGWRISHRTHHQNHGHVENDESW PL E++Y+ L +TR LR+ +P P+LAYP YL RSPGK GSHF+P S LF PSERK + TST CW+ M L+ LSFV GP+ +LK+YG+PY IFVMWLD VT Sbjct: 83 PLYWAAQGTLFWAIFVLGHDCGHGSFSDIPLLNSVVGHILHSFILVPYHGWRISHRTHHQNHGHVENDESWVPLPERVYKKLPHSTRMLRYTVPLPMLAYPLYLCYRSPGKEGSHFNPYSSLFAPSERKLIATSTTCWSIMFVSLIALSFVFGPLAVLKVYGVPYIIFVMWLDAVT 258 HSP 2 Score: 59.6918 bits (143), Expect = 4.841e-87 Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 2 Query: 602 YLHHHGHENKLPWYRGKEWSYLRG 673 YLHHHGH+ KLPWYRGKEWSYLRG Sbjct: 259 YLHHHGHDEKLPWYRGKEWSYLRG 282
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD12_CREAL (Delta(12) fatty acid dehydrogenase OS=Crepis alpina PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.420e-25 Identity = 64/188 (34.04%), Postives = 101/188 (53.72%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEK----IYRTLDSAT-RFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVM---GPMQLLKLYGLPYWIFVMWLDLVT 602 PLYW Q ++ L+V+GH+CGH +FS+ ++ VG +LHS ++ PY W+ SHR HH N ++NDE + P S+ Y+ L+ R L I F L +P YL++ GK +HFDP S +F ER V+ S + + A+L G+ + G + +YG+P ++ D++T Sbjct: 80 PLYWFCQASILTGLWVIGHECGHHAFSDYQWVDDTVGFILHSFLMTPYFSWKYSHRNHHANTNSLDNDEVYIPKSKAKVALYYKVLNHPPGRLLIMFITF-TLGFPLYLFTNISGKKYERFANHFDPMSPIFKERERFQVLLSDL---GLLAVLYGVKLAVAAKGAAWVTCIYGIPVLGVFIFFDIIT 263 HSP 2 Score: 26.5646 bits (57), Expect = 1.420e-25 Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 2 Query: 602 YLHHHGHENKLPWYRGKEWSYLRG 673 YLHH LP Y EW++LRG Sbjct: 264 YLHHT--HLSLPHYDSSEWNWLRG 285
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD6E_ARATH (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Arabidopsis thaliana GN=FAD2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.071e-23 Identity = 60/185 (32.43%), Postives = 92/185 (49.73%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTL-----DSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 PLYWA QG + ++V+ H+CGH +FS+ L+ VG + HS +LVPY W+ SHR HH N G +E DE + P + + + R + + F +L +P YL G+ HF PN+ ++ ER + S A+ L + G ++ LYG+P I +L L+T Sbjct: 87 PLYWACQGCVLTGIWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSAIKWYGKYLNNPLGRIMMLTVQF-VLGWPLYLAFNVSGRPYDGFACHFFPNAPIYNDRERLQIYLSDAGILAVCFGLYRYAAAQGMASMICLYGVPLLIVNAFLVLIT 270 HSP 2 Score: 23.483 bits (49), Expect = 6.071e-23 Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 2 Query: 614 HGHENKLPWYRGKEWSYLRG 673 H H + LP Y EW +LRG Sbjct: 274 HTHPS-LPHYDSSEWDWLRG 292
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD12_MORIS (Delta(12) fatty acid desaturase OS=Mortierella isabellina PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.982e-22 Identity = 63/200 (31.50%), Postives = 93/200 (46.50%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE--------------------KIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 P YW QG + ++VL H+CGH SFS LN+ VG +LHS +LVPYH WRISH HH+ GH+ D+ + P + ++ ++ L + + L +P YL + G+ SHF S +F P D+I S + A L+ S + + + K Y +PY WL L+T Sbjct: 94 PAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKESAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIIPYLFVNFWLVLIT 293
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD12_MORAP (Delta(12) fatty acid desaturase OS=Mortierella alpina PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.589e-22 Identity = 63/200 (31.50%), Postives = 93/200 (46.50%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSE--------------------KIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 P YW QG + ++VL H+CGH SFS LN+ VG +LHS +LVPYH WRISH HH+ GH+ D+ + P + ++ ++ L + + L +P YL + G+ SHF S +F P D+I S + A L+ S + + + K Y +PY WL L+T Sbjct: 94 PAYWIMQGIVCTGIWVLAHECGHQSFSTSKTLNNTVGWILHSMLLVPYHSWRISHSKHHKATGHMTKDQVFVPKTRSQVGLPPKENAAAAVQEEDMSVHLDEEAPIVTLFWMVIQFLFGWPAYLIMNASGQDYGRWTSHFHTYSPIFEPRNFFDIIISDLGVLAALGALIYASMQLSLLTVTKYYIVPYLFVNFWLVLIT 293
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD6E_BRAJU (Omega-6 fatty acid desaturase, endoplasmic reticulum OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.438e-22 Identity = 62/194 (31.96%), Postives = 93/194 (47.94%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP------------LSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRS------PGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 PLYWA QG + ++V+ H+CGH +FS+ L+ VG + HS +LVPY W+ SHR HH N G +E DE + P L+ + RT+ +F L +P Y W+ + P HF PN+ ++ ER + S A+ L + G ++ LYG+P I +L L+T Sbjct: 87 PLYWACQGVVLTGVWVIAHECGHHAFSDYQWLDDTVGLIFHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSDIKWYGKYLNNPLGRTVMLTVQF--------TLGWPLY-WAFNVSGRPYPEGFACHFHPNAPIYNDRERLQIYVSDAGILAVCYGLYRYAAAQGVASMVCLYGVPLLIVNAFLVLIT 271 HSP 2 Score: 23.483 bits (49), Expect = 8.438e-22 Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 2 Query: 614 HGHENKLPWYRGKEWSYLRG 673 H H + LP Y EW +LRG Sbjct: 275 HTHPS-LPHYDSSEWDWLRG 293
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FD6E2_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 OS=Glycine max GN=FAD2-2 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.417e-21 Identity = 57/184 (30.98%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 78 LYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTL-----DSATRFLRFKIPFPLLAYPFYLWSRSPGKS----GSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 +YWA QG + ++V+ H+CGH +FS+ L+ +VG +LHS++LVPY W+ SHR HH N G +E DE + P + + + R L + L +P YL G+ H+DP ++ ER + S A+ L L+ G ++ +YG+P + +L L+T Sbjct: 88 IYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSCIKWYSKYLNNPPGRVLTLAVTL-TLGWPLYLALNVSGRPYDRFACHYDPYGPIYSDRERLQIYISDAGVLAVVYGLFRLAMAKGLAWVVCVYGVPLLVVNGFLVLIT 270 HSP 2 Score: 23.0978 bits (48), Expect = 2.417e-21 Identity = 8/14 (57.14%), Postives = 9/14 (64.29%), Query Frame = 2 Query: 632 LPWYRGKEWSYLRG 673 LP Y EW +LRG Sbjct: 279 LPHYTSSEWDWLRG 292
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FD6E1_SOYBN (Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 OS=Glycine max GN=FAD2-1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.351e-20 Identity = 59/185 (31.89%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHP--------LSEKIYRTLDSATRFL-RFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 P+YW QG + ++V+ H+CGH +FS ++ VVG LHS++LVPY W+ISHR HH N G ++ DE + P S+ + L A L I +P+ F + R SH+ P + ++ ER + S V ++ L ++ + G + LL +YG+P I +L +T Sbjct: 91 PIYWVLQGCLLTGVWVIAHECGHHAFSKYQWVDDVVGLTLHSTLLVPYFSWKISHRRHHSNTGSLDRDEVFVPKPKSKVAWFSKYLNNPLGRAVSLLVTLTIGWPMY-LAFNVSGRPYDSFASHYHPYAPIYSNRERLLIYVSDVALFSVTYSLYRVATLKGLVWLLCVYGVPLLIVNGFLVTIT 274 HSP 2 Score: 21.557 bits (44), Expect = 3.351e-20 Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 2 Query: 632 LPWYRGKEWSYLRG 673 LP Y EW +L+G Sbjct: 283 LPHYDSSEWDWLKG 296
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: DESA_SPIPL (Fatty acid desaturase OS=Spirulina platensis GN=desA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.920e-17 Identity = 52/177 (29.38%), Postives = 86/177 (48.59%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAAL-LVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 P+ W GT FV+GHDCGH SFS + +N VGH+L I+ P+H WRI H HH+ +E D +W P ++ Y+ +A +F+ ++ + L + + HFD F +R+ V S++ AA+ + +G +K + +P+ +F W+ T Sbjct: 71 PVVWVFTGTALTGFFVIGHDCGHRSFSRNVWVNDWVGHILFLPIIYPFHSWRIGHNQHHKYTNRMELDNAWQPWRKEEYQ---NAGKFM--QVTYDLFRGRAWWIGSILHWASIHFDWTK--FEGKQRQQVKFSSLLVIGAAAIAFPTMILTIGVWGFVKFWVIPWLVFHFWMSTFT 240
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: DESA_SYNY3 (Fatty acid desaturase OS=Synechocystis sp. (strain PCC 6803) GN=desA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.621e-16 Identity = 47/177 (26.55%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDV-ITSTVCWTAMAALLVGLSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 P+ W GT FV+GHDCGH SF+ +N +VGH+ + ++ P+H WR+ H HH + +E D +W P S + ++ + R + + PF+ S HF ++ F +R V ++ V + A L G +K + +P+ ++ W+ T Sbjct: 72 PITWIWTGTALTGAFVVGHDCGHRSFAKKRWVNDLVGHIAFAPLIYPFHSWRLLHDHHHLHTNKIEVDNAWDPWSVEAFQASPAIVRLF-----YRAIRGPFWWTGSIFHWSLMHFKLSN--FAQRDRNKVKLSIAVVFLFAAIAFPALIITTGVWGFVKFWLMPWLVYHFWMSTFT 241 The following BLAST results are available for this feature:
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623715 ID=BQ623715; Name=BQ623715; organism=Citrus sinensis; type=EST; length=674bpback to top |