BQ623715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD6C_SOYBN (Omega-6 fatty acid desaturase, chloroplastic OS=Glycine max PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15 Identity = 55/180 (30.56%), Postives = 79/180 (43.89%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAY-PFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVM---GPMQLLKLYGLPYWIFVMWLDLVT 602 PL W GT FV+GHDC H SFS++ + +VG L ++ PY WR H HH + D +WHP +++ +T LR I + Y PF W HFD F PSE V S C A + +G ++ G M +K + +P+ + W+ T Sbjct: 147 PLAWVWTGTAITGFFVIGHDCAHRSFSSNKLVEDIVGTLAFMPLIYPYEPWRFKHDRHHAKTNMLREDTAWHP----VWKDEFESTPLLRKAI---IYGYGPFRCWMSIAHWLMWHFDLKK--FRPSEVPRVKISLAC--VFAFIAIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFT 315
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD6C_BRANA (Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.747e-13 Identity = 53/179 (29.61%), Postives = 78/179 (43.58%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVG---LSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 PL WA GT FV+GHDC H SFS + + +VG L ++ PY WR H HH + +D +W P+ + + ++ LR I F P W HF N F PSE V S C A + VG + + +G + +K + +P+ + W+ T Sbjct: 148 PLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPVPPEEF----DSSPVLRKAIIFGY--GPIRPWLSIAHWVNWHF--NLRKFRPSEVNRVKISLAC--VFAFMAVGWPLIIYKVGVLGWVKFWLMPWLGYHFWMSTFT 316
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD6C_ARATH (Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.429e-12 Identity = 49/179 (27.37%), Postives = 75/179 (41.90%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAYPFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVG---LSFVMGPMQLLKLYGLPYWIFVMWLDLVT 602 PL WA GT FV+GHDC H SFS + + +VG L ++ PY WR H HH + +D +W P+ + + + + + F P W HF N F SE V S C A + VG + + +G + +K + +P+ + W+ T Sbjct: 153 PLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPVPPEEFESSPVMRKAIIFGYG------PIRPWLSIAHWVNWHF--NLKKFRASEVNRVKISLAC--VFAFMAVGWPLIVYKVGILGWVKFWLMPWLGYHFWMSTFT 321
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Match: FAD6C_SPIOL (Omega-6 fatty acid desaturase, chloroplastic OS=Spinacia oleracea GN=FAD6 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.143e-12 Identity = 49/180 (27.22%), Postives = 75/180 (41.67%), Query Frame = 3 Query: 75 PLYWAAQGTMFWALFVLGHDCGHGSFSNDHKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIYRTLDSATRFLRFKIPFPLLAY-PFYLWSRSPGKSGSHFDPNSDLFVPSERKDVITSTVCWTAMAALLVGLSFVM---GPMQLLKLYGLPYWIFVMWLDLVT 602 PL WA GT FV+GHDC H SFS + + +VG L ++ PY WR H HH + D +W P+ ++ + + L + AY P W HF N F SE K S A +++G ++ G + +K + +P+ + W+ T Sbjct: 153 PLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFMPLIYPYEPWRFKHDQHHTKTNMLREDTAWLPIMKEDIESSPGLRKAL-------IYAYGPLRTWMSIAHWLKVHF--NLKDFRQSEVKRATISLA--AVFAFMVIGWPLIIYKTGIVGWIKFWLMPWLGYHFWMSTFT 321 The following BLAST results are available for this feature:
BLAST of BQ623715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623715 ID=BQ623715; Name=BQ623715; organism=Citrus sinensis; type=EST; length=674bpback to top |