BQ623717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_THEPD (Replication factor C small subunit OS=Thermofilum pendens (strain Hrk 5) GN=rfcS PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.984e-38 Identity = 86/198 (43.43%), Postives = 122/198 (61.62%), Query Frame = 2 Query: 17 LELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVR 610 LELNASD+RGIDV+R +I+D+A T KLV+LDEAD MT DAQ ALRR +E +++NTRF LI N +KII +QSRC FRF PL +RL+ + + EG+ V +G L A+ GD+RKA+N LQ+ S+ +TEE VY G PK++ ++ L + ++ ++ + GL+ VDI+R Sbjct: 71 LELNASDERGIDVIRSRIKDYARTLPIG---DVPFKLVILDEADNMTGDAQQALRRTMELFSRNTRFILIANYASKIIEPIQSRCAVFRFQPLPKGDAFQRLRWIAQQEGITVDDGALEAIWEESQGDLRKAINTLQAASAISRNVTEEVVYAALGRVKPKEVREMIESALKGNLLEARDKLRLLLYNYGLSGVDIIR 265
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_HALWD (Replication factor C small subunit OS=Haloquadratum walsbyi (strain DSM 16790) GN=rfcS PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.984e-38 Identity = 86/205 (41.95%), Postives = 128/205 (62.44%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 + N +LELNASD+RGIDVVR +I++FA + SFG +++ LDEAD++T DAQ ALRR +E++ NTRF L CN +KII +QSRC FRF+PL + + K + AE +++TE GL ALV GDMR+A+N LQ+ + + EE VY T P+DIE + ++ F + ++ + + G+A DI+ ++ Sbjct: 400 WQNNLLELNASDERGIDVVRDRIKNFARS---SFG-GYDHRIIFLDEADSLTDDAQSALRRTMEQFADNTRFILSCNYSSKIIDPIQSRCAVFRFSPLSETAIRGQTKDIAAAENIELTEDGLDALVYAAGGDMRRAINSLQAAATTGEVVDEETVYTITSTARPEDIETMVTAAIDGDFTTARSQLQTLLVDTGMAGGDIIDQL 600
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_SULTO (Replication factor C small subunit OS=Sulfolobus tokodaii GN=rfcS PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.481e-37 Identity = 86/205 (41.95%), Postives = 129/205 (62.93%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 Y LELNASD+RGIDV+R ++++FA T + G K+VLLDEAD MT DAQ ALRR +E YT+ TRF L CN ++KII +QSR FRF PL+ V RL ++ + E ++ + L + + GDMRKA+NILQ++ + ++T EAVY G PK+I ++ L +F + +++ E+ + GL+ DI++++ Sbjct: 69 YRQYFLELNASDERGIDVIRNKVKEFARTVA---GGNVPFKVVLLDEADNMTADAQQALRRTMELYTETTRFILACNYLSKIIEPIQSRTALFRFYPLKKEDVVARLAYIAKNEKVEYDQKALETIYDITQGDMRKAINILQASSVYG-KVTVEAVYKVLGLAQPKEIREMIMLALQGNFLKAREKLRELLVNYGLSGEDIIKQI 269
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_HALMA (Replication factor C small subunit OS=Haloarcula marismortui GN=rfcS PE=3 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.481e-37 Identity = 86/200 (43.00%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 17 LELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 LELNASD+RGIDVVR +I++FA T SFG +++ LDEADA+T DAQ ALRR +E+++ N RF L CN ++II +QSRC FRF+PL V E ++ + E +++TE GL ALV +GDMRKA+N LQ+ ++ + E AVY T P++I + L+ F S + + +G+A DI+ ++ Sbjct: 81 LELNASDERGIDVVRDRIKNFART---SFG-GVEYRIIFLDEADALTSDAQSALRRTMEQFSNNVRFILSCNYSSQIIDPIQSRCAVFRFSPLADDAVAEEIRTIAAEEDIELTEDGLDALVYAADGDMRKAINGLQAASVSGDTVDESAVYAITSTARPEEIRTMVQSALDGDFTASRATLDRLLTEEGIAGGDIIDQL 276
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_METST (Replication factor C small subunit OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rfcS PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.934e-37 Identity = 81/199 (40.70%), Postives = 123/199 (61.81%), Query Frame = 2 Query: 17 LELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVRE 613 LELNASD RGID VR +I+ F ++ V A +++ LDE D MTKDAQ ALRR +E YTK + F L CN +KII +QSRC FRF+P++ ++ +RLK++ EG++ + L +V GDMRK++NILQ++ +TEEAVY PKD+ +I LN F ++ + ++ + +G++ D++ + Sbjct: 70 LELNASDARGIDTVRNEIKSFCKLKA----VGAPFRIIFLDEVDNMTKDAQQALRREMEMYTKTSSFILSCNYSSKIIDPIQSRCAIFRFSPIKAANIIKRLKYIASEEGIEAEQSALENIVYFTQGDMRKSINILQASTTTENTVTEEAVYDVISRAKPKDVRKIINKALNHDFMEARDLLRDIMIIEGVSGDDLITQ 264
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_AERPE (Replication factor C small subunit OS=Aeropyrum pernix GN=rfcS PE=3 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 4.309e-37 Identity = 83/205 (40.49%), Postives = 129/205 (62.93%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 Y +LELNASD+RGI+V+R+++++FA +++ + K+VLLDEAD MT DAQ ALRR++E Y+ TRF LI N +KII +QSRC FRF PL V ERL+++ E EG+D E L A+ + GDMRKA+N+LQ+ ++T +AVY G P+++ ++ L F + + ++ + G++ D+ R++ Sbjct: 69 YRQYMLELNASDERGINVIREKVKEFARSRT---PPEIPFKIVLLDEADNMTSDAQQALRRLMELYSSVTRFILIANYPSKIIDPIQSRCAFFRFQPLSKQDVIERLRYIAENEGVDYEEEALDAIYEISEGDMRKAINVLQAASYLG-KVTVDAVYRVVGMAKPREVREMLATALKGDFTAARSLLRKIMIEYGMSGEDVARQI 269
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_METAC (Replication factor C small subunit OS=Methanosarcina acetivorans GN=rfcS PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.627e-37 Identity = 84/204 (41.18%), Postives = 125/204 (61.27%), Query Frame = 2 Query: 20 ELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHM--ASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREVTMV 625 ELNASD+RGID+VR +I++FA T A K++ LDEADA+T DAQ ALRR +E+++ N RF L CN +KII +QSRC +RF L + ERL+++ +GL +TEGG AL+ + GDMRKA+N LQ+ + I+ E +Y T P++I+ + L +F + K ++ + +GL+ DIV ++ V Sbjct: 82 ELNASDERGIDIVRNKIKNFAKTAPIG---GAPFKIIFLDEADALTADAQSALRRTMERFSSNCRFILSCNYSSKIIEPIQSRCAVYRFRRLSDEAIKERLEYIAGDQGLSITEGGYEALIYVAQGDMRKAVNSLQAAAFIDTDKSISRETIYRTTATANPEEIKNLIETALRGNFRIARKELNRLLYEEGLSGEDIVGQIYRV 282
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS1_PYRAR (Replication factor C small subunit 1 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rfcS1 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.627e-37 Identity = 80/198 (40.40%), Postives = 125/198 (63.13%), Query Frame = 2 Query: 17 LELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVR 610 LELNASD+RGI+V+R+++++FA T KA KLV+LDEAD MT DAQ ALRR++E Y +NTRF L+ N V++II + SRC FRF+P+ + ERL+H+ ++EG+++ + + + + GDMRKA+N+LQ S+ + AV T P D+ ++ N + +++ E+ KG+A +D +R Sbjct: 71 LELNASDERGINVIRERVKEFARTAPVG---KAPFKLVILDEADNMTSDAQQALRRIMEMYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRSLMAERLRHIAKSEGIELRDDAIDLIYEVSEGDMRKAINLLQVAAATSKVVDANAVASATTMIRPADVVELFNLAFNGDVTKAREKLRELMYVKGIAGIDFIR 265
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_ARCFU (Replication factor C small subunit OS=Archaeoglobus fulgidus GN=rfcS PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.349e-37 Identity = 79/205 (38.54%), Postives = 125/205 (60.98%), Query Frame = 2 Query: 2 YHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 + + +E+NASD+RGIDVVR +I++FA T A K++ LDEADA+T DAQ ALRR +E Y+K+ RF L CN V++II +QSRC FRF P+ + +RL + E EG+ +TE GL AL+ + GD RKA+N LQ + + + +Y T P+++ ++ L +F ++ + + + + G++ DIV ++ Sbjct: 67 WRDNFIEMNASDERGIDVVRHKIKEFARTAPIG---GAPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQL 268
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Match: RFCS_NATPD (Replication factor C small subunit OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rfcS PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.254e-36 Identity = 84/200 (42.00%), Postives = 127/200 (63.50%), Query Frame = 2 Query: 17 LELNASDDRGIDVVRQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNKIIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMTMRKGLALVDIVREV 616 LELNASD RGIDVVR +I+ FA SFG +++ LDEADA+T DAQ ALRR +E+++ NTRF L CN ++II +QSRC FRF+PL V E+++ + + EG+++T+ G+ ALV +GDMRKA+N LQ+ + + EEAVY T P++I ++ ++ F + ++ + G+A DI+ ++ Sbjct: 79 LELNASDQRGIDVVRDRIKSFARA---SFG-GYDHRIIFLDEADALTSDAQSALRRTMEQFSDNTRFILSCNYSSQIIDPIQSRCAVFRFSPLGDAAVDEQIRIIADTEGIELTDDGVDALVYAADGDMRKAINGLQAAAVMGGTVDEEAVYTITSTARPEEIREMVTEAMDGDFTAARSQLETLLTDVGIAGGDIIDQL 274 The following BLAST results are available for this feature:
BLAST of BQ623717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623717 ID=BQ623717; Name=BQ623717; organism=Citrus sinensis; type=EST; length=632bpback to top |