BQ623720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC1_BRAJU (Superoxide dismutase [Cu-Zn] 1 OS=Brassica juncea GN=SODCC1 PE=2 SV=3) HSP 1 Score: 221.476 bits (563), Expect = 1.464e-58 Identity = 103/135 (76.30%), Postives = 113/135 (83.70%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 461 + F+QEG+G TTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPHFNP GK HG PED NRHA TATFT+ D+QIPL GPNSI+GRAVVVHA+PDDLGKGGHELS TTGNAGGRVACGIIGLQG Sbjct: 18 IFFTQEGNGTTTVTGTVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPEGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDSQIPLDGPNSIVGRAVVVHAEPDDLGKGGHELSLTTGNAGGRVACGIIGLQG 152 HSP 2 Score: 25.7942 bits (55), Expect = 1.464e-58 Identity = 12/19 (63.16%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 5 MVKAVAVLGGTEGVKGTCF 61 M K V VL +EGVKGT F Sbjct: 1 MGKGVRVLNSSEGVKGTIF 19
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC1_SOLLC (Superoxide dismutase [Cu-Zn] 1 OS=Solanum lycopersicum GN=SODCC.1 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 1.464e-58 Identity = 102/133 (76.69%), Postives = 112/133 (84.21%), Query Frame = 3 Query: 63 FSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 461 F+Q G PTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NPAGKEHG PEDE RHA TA+FT+ D QIPL+GP SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACGIIGLQG Sbjct: 20 FTQVGVAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRIACGIIGLQG 152 HSP 2 Score: 28.4906 bits (62), Expect = 1.464e-58 Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = 2 Query: 5 MVKAVAVLGGTEGVKGTCFLF 67 MVKAVAVL +EGV GT +LF Sbjct: 1 MVKAVAVLNSSEGVSGT-YLF 20
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_BRAOC (Superoxide dismutase [Cu-Zn] OS=Brassica oleracea var. capitata GN=SODCC PE=1 SV=2) HSP 1 Score: 217.238 bits (552), Expect = 3.245e-58 Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 461 + F+ EG+G TTV+G++SGL+PG HGFHVHALGD TNGCMSTGPHFNP GK HG PED NRHA TATFT+ D+QIPLSGPNSI+GRA+VVHADPDDLGKGGHELS +TGNAGGRVACGIIGLQG Sbjct: 18 IFFTHEGNGATTVTGTVSGLRPGLHGFHVHALGDNTNGCMSTGPHFNPDGKTHGAPEDANRHAGDLGNIIVGDDGTATFTITDSQIPLSGPNSIVGRAIVVHADPDDLGKGGHELSLSTGNAGGRVACGIIGLQG 152 HSP 2 Score: 28.8758 bits (63), Expect = 3.245e-58 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 5 MVKAVAVLGGTEGVKGTCF 61 M K VAVL +EGVKGT F Sbjct: 1 MAKGVAVLNSSEGVKGTIF 19
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC2_BRAJU (Superoxide dismutase [Cu-Zn] 2 OS=Brassica juncea GN=SODCC2 PE=2 SV=3) HSP 1 Score: 216.853 bits (551), Expect = 9.376e-58 Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 461 + F+QEG+G TTV+G++SGLKPG HGFHVHALGDTTNG MSTGPHFNP GK+HG PED NRHA TATFT+ D QIPLSGPNSI+GRAVVVHADPD LGKGGHELS TTGNAGGRVACGIIGLQG Sbjct: 18 IFFAQEGEGKTTVTGTVSGLKPGLHGFHVHALGDTTNGSMSTGPHFNPDGKQHGAPEDANRHAGDLGNIIVGDDGTATFTITDCQIPLSGPNSIVGRAVVVHADPDVLGKGGHELSLTTGNAGGRVACGIIGLQG 152 HSP 2 Score: 27.7202 bits (60), Expect = 9.376e-58 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 5 MVKAVAVLGGTEGVKGTCF 61 M K VAVL +EGVKGT F Sbjct: 1 MGKGVAVLNSSEGVKGTIF 19
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_PINSY (Superoxide dismutase [Cu-Zn] OS=Pinus sylvestris GN=SODCC PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57 Identity = 100/135 (74.07%), Postives = 113/135 (83.70%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 461 V F+QEGDGPTTV+G +SGL PG HGFHVHALGDTTNGCMSTGPHFNP GKEHG P D+NRHA T F++ D+QIPLSGP+SI+GRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACG++GLQG Sbjct: 20 VQFTQEGDGPTTVTGKISGLSPGLHGFHVHALGDTTNGCMSTGPHFNPLGKEHGAPTDDNRHAGDLGNVTVGTDGTVEFSITDSQIPLSGPHSIVGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGVVGLQG 154
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_PANGI (Superoxide dismutase [Cu-Zn] OS=Panax ginseng GN=SODCC PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 2.422e-55 Identity = 101/135 (74.81%), Postives = 109/135 (80.74%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQG 461 + F+QE DGPTTV+G LSGL PG HGFHVHALGDTTNGC+STGPH+NPA KEHG PEDE RHA TA FT+VD QIPL G SIIGRAVVVHADPDDLGKGGHELSK+TGNAGGR+ACG IGLQG Sbjct: 18 IHFTQEEDGPTTVTGKLSGLAPGLHGFHVHALGDTTNGCLSTGPHYNPANKEHGAPEDETRHAGDLGNVTVGEDGTAEFTIVDKQIPLIGSGSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRLACGFIGLQG 152
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.516e-48 Identity = 86/133 (64.66%), Postives = 102/133 (76.69%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ +QE DGPTTV+ ++GL PGPHGFH+H GDTTNGC+STGPHFNP G HG PEDENRHA A T+VDNQIPL+GPN+++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 85 VTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGL 217 HSP 2 Score: 22.3274 bits (46), Expect = 1.516e-48 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 11 KAVAVLGGTEGVKGTCFL 64 KAVAVL GT V+G L Sbjct: 70 KAVAVLKGTSSVEGVVTL 87
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 3.355e-48 Identity = 88/133 (66.17%), Postives = 101/133 (75.94%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ +QE DGPTTV+ +SGL PG HGFH+H GDTTNGCMSTGPHFNP K HG PEDE RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 87 VTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGL 219 HSP 2 Score: 22.3274 bits (46), Expect = 3.355e-48 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 11 KAVAVLGGTEGVKGTCFL 64 KAVAVL GT V+G L Sbjct: 72 KAVAVLKGTSNVEGVVTL 89
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.051e-46 Identity = 87/133 (65.41%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ SQE DGPTTVS ++GL PG HGFH+H GDTTNGCMSTG HFNP G HG PED+ RHA A T+VD QIPLSGPN++IGRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 77 VTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCMSTGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 209 HSP 2 Score: 22.3274 bits (46), Expect = 1.051e-46 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 11 KAVAVLGGTEGVKGTCFL 64 KAVAVL GT V+G L Sbjct: 62 KAVAVLKGTSSVEGVVTL 79
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.785e-46 Identity = 86/133 (64.66%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ +Q+ DGPTTV ++GL PG HGFH+H GDTTNGCMSTGPHFNP G HG P DE RHA A T+VDNQIPLSGPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 84 VTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTNGCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 216 HSP 2 Score: 22.3274 bits (46), Expect = 1.785e-46 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 11 KAVAVLGGTEGVKGTCFL 64 KAVAVL GT V+G L Sbjct: 69 KAVAVLKGTSNVEGVVTL 86 The following BLAST results are available for this feature:
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623720 ID=BQ623720; Name=BQ623720; organism=Citrus sinensis; type=EST; length=601bpback to top |