BQ623720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 1.786e-46 Identity = 85/133 (63.91%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ +Q+ GPTTV+ ++GL PGPHGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VDNQIPL+GPNS++GRA VVH DDLGKGGHELS TTGNAGGR+ACG+IGL Sbjct: 81 VTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGL 213 HSP 2 Score: 21.9422 bits (45), Expect = 1.786e-46 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 11 KAVAVLGGTEGVKGTCFL 64 KAVAVL GT V+G L Sbjct: 66 KAVAVLKGTSDVEGVVTL 83
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_PINSY (Superoxide dismutase [Cu-Zn], chloroplastic (Fragment) OS=Pinus sylvestris GN=SODCP PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.968e-45 Identity = 86/133 (64.66%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ SQE +GPTTV L+GL PG HGFH+H GDTTNGCMSTG HFNP HG PED+ RHA A T+VDNQIPLSGP+S+IGRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 6 VTLSQEDNGPTTVKVRLTGLTPGKHGFHLHEFGDTTNGCMSTGSHFNPKKLTHGAPEDDVRHAGDLGNIVAGSDGVAEATIVDNQIPLSGPDSVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 138
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.473e-44 Identity = 82/133 (61.65%), Postives = 100/133 (75.19%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ +Q+ +GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 67 VTLTQDDEGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.924e-44 Identity = 84/133 (63.16%), Postives = 98/133 (73.68%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ SQ+ DGPTTV+ ++GL PG HGFH+H GDTTNGCMSTG HFNP HG P DE RHA A T+VDNQIPL+GPNS++GRA+VVH DDLGKGGHELS TTGNAGGR+ACG++GL Sbjct: 82 VTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGL 214
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.924e-44 Identity = 83/133 (62.41%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ +QE + PTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VDNQIPL+GPNS+IGRA+VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 67 VTLTQENESPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGPHFNPNQLTHGAPEDEIRHAGDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 199
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.650e-44 Identity = 82/133 (61.65%), Postives = 97/133 (72.93%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V+ +Q+ GPTTV+ ++GL PG HGFH+H GDTTNGC+STGPHFNP HG PEDE RHA A T+VD QIPLSGPNS++GRA VVH DDLGKGGHELS +TGNAGGR+ACG++GL Sbjct: 76 VTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGL 208 HSP 2 Score: 21.557 bits (44), Expect = 4.650e-44 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 11 KAVAVLGGTEGVKGTCFL 64 KAVAVL GT V+G L Sbjct: 61 KAVAVLKGTSQVEGVVTL 78
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC2_MESCR (Superoxide dismutase [Cu-Zn] 2 OS=Mesembryanthemum crystallinum GN=SODCC.2 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.680e-44 Identity = 85/134 (63.43%), Postives = 95/134 (70.90%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 458 + F Q+ G T V G ++GL PG HGFH+HALGDTTNGC STGPHFNP K+HG P D RHA A +V D QIPLSG +SI+GRAVVVHAD DDLG+ GHELSKTTGNAG RV CGIIGLQ Sbjct: 20 LQFIQDSTGVTHVKGRITGLTPGLHGFHIHALGDTTNGCNSTGPHFNPLKKDHGAPFDTERHAGDLGNVVAGADGVAEVSVRDTQIPLSGQHSILGRAVVVHADQDDLGRTGHELSKTTGNAGARVRCGIIGLQ 153 HSP 2 Score: 23.483 bits (49), Expect = 4.680e-44 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2 Query: 5 MVKAVAVLGGTEGVKGT 55 ++KAVAV+ G VKG+ Sbjct: 3 VIKAVAVINGNNNVKGS 19
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_DROVI (Superoxide dismutase [Cu-Zn] OS=Drosophila virilis GN=Sod PE=3 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 1.800e-42 Identity = 82/134 (61.19%), Postives = 92/134 (68.66%), Query Frame = 3 Query: 57 VSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V F QEG+G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH + D +I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 17 VFFEQEGEGCPVKVTGEVTGLAKGQHGFHVHEFGDNTNGCMSSGPHFNPYQKEHGAPTDENRHLGDLGNIIANGDGPTPVNICDCKITLLGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_DROWI (Superoxide dismutase [Cu-Zn] OS=Drosophila willistoni GN=Sod PE=3 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 5.239e-42 Identity = 81/134 (60.45%), Postives = 92/134 (68.66%), Query Frame = 3 Query: 57 VSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V F QE +G P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHG P DENRH + D++I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 17 VFFEQEDNGAPVKVTGEVTGLGKGLHGFHVHEFGDNTNGCMSSGPHFNPHSKEHGAPGDENRHLGDLGNIEASGSGPTAVNITDSKITLVGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 150
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.167e-41 Identity = 81/134 (60.45%), Postives = 91/134 (67.91%), Query Frame = 3 Query: 57 VSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V F QE + P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP GKEHG P DENRH + D +I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ CG+IG+ Sbjct: 9 VFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGCGVIGI 142 The following BLAST results are available for this feature:
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623720 ID=BQ623720; Name=BQ623720; organism=Citrus sinensis; type=EST; length=601bpback to top |