BQ623720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.020e-34 Identity = 69/134 (51.49%), Postives = 83/134 (61.94%), Query Frame = 3 Query: 57 VSFSQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 + F Q+ G P +SG ++GL G HGFHVH GD T GC S GPHFNP K+HG P DE RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 19 IHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 8.956e-34 Identity = 69/134 (51.49%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 57 VSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 19 INFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 8.956e-34 Identity = 69/134 (51.49%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 57 VSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 19 INFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.027e-33 Identity = 70/135 (51.85%), Postives = 84/135 (62.22%), Query Frame = 3 Query: 57 VSFSQEGDGP-TTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 V F QE D TT+S +++G +P HGFH+H GD TNGC S+G HFNP K HG PEDENRH A + D I + GP SI+GR VVVHA DDLG+GG+E S TGNAG R ACG+IG+ Sbjct: 18 VHFEQEADAAVTTISWNITGFEPNTEHGFHIHEFGDVTNGCTSSGSHFNPFKKTHGSPEDENRHVGDMGNVLADANGVAVGSAKDPLIKIFGPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACGVIGI 152 HSP 2 Score: 24.6386 bits (52), Expect = 1.027e-33 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 5 MVKAVAVLGGTEGVKG 52 MVKAVAVL G GV G Sbjct: 1 MVKAVAVLKGDAGVSG 16
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.170e-33 Identity = 69/134 (51.49%), Postives = 86/134 (64.18%), Query Frame = 3 Query: 57 VSFSQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+DE RH A+ ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 20 INFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 153
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.170e-33 Identity = 70/141 (49.65%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 72 EGDGPT-------------TVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 +GDGP V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH A +VD+ I LSG +SIIGR +VVH PDDLG+GG+E S TGNA R+ACG+IG+ Sbjct: 10 KGDGPVQGTIRFEAKGHTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPDDLGRGGNEESTKTGNARNRLACGVIGI 150
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 1.338e-33 Identity = 65/125 (52.00%), Postives = 80/125 (64.00%), Query Frame = 3 Query: 84 PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 PTT++ ++G P GFH+H GD TNGC+S GPHFNP K HG P+DENRH A + D+ + L GP S++GR+VVVHA DDLGKGG+E S TGNAG R ACG+IGL Sbjct: 28 PTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITDSLVKLIGPTSVVGRSVVVHAGTDDLGKGGNEESLKTGNAGPRPACGVIGL 152 HSP 2 Score: 25.7942 bits (55), Expect = 1.338e-33 Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 2 Query: 5 MVKAVAVLGGTEGVKGTCFL 64 MVKAVAVL G+ GV G L Sbjct: 1 MVKAVAVLRGSAGVSGVVTL 20
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.528e-33 Identity = 70/135 (51.85%), Postives = 85/135 (62.96%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGS-LSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGLQ 458 V F QEG+ G L GL PG HGFHVH GD TNGC+S GPHFNPA K+H P+DE+RH A + D +I L+GP SIIGR +V+H DDLG+GG+E S TGNAG R+ACG+IG + Sbjct: 19 VYFEQEGNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITD-KISLTGPYSIIGRTMVIHEKADDLGRGGNEESLKTGNAGSRLACGVIGTE 152
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 142.51 bits (358), Expect = 1.528e-33 Identity = 69/133 (51.88%), Postives = 83/133 (62.41%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 + F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+DE RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG +ACG+IG+ Sbjct: 19 IHFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSCLACGVIGI 150
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 1.995e-33 Identity = 66/133 (49.62%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 57 VSFSQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGPPEDENRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 455 + F Q+G GP V G ++GL G H FHVH GD GC S GPHFNP K+HG P+DE RH A + D+ I LSG S+IGR +VVH DDLGKGG++ S TGNAG R+ACG+IG+ Sbjct: 19 IHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLACGVIGI 151 The following BLAST results are available for this feature:
BLAST of BQ623720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623720 ID=BQ623720; Name=BQ623720; organism=Citrus sinensis; type=EST; length=601bpback to top |