BQ623725
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.215e-22 Identity = 59/136 (43.38%), Postives = 77/136 (56.62%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLSPRWSI*PTG 393 E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L Y G + + A+ A ++VL+G E YR+ G ++ D L P S P G Sbjct: 63 ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 197
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22 Identity = 59/136 (43.38%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLSPRWSI*PTG 393 E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A ++VL+G E YR+ G ++ D L P + P G Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLG 198
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22 Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLSPRWSI*PTG 393 E P YLTGE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YRI G ++ D + P S P G Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLG 139
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.199e-22 Identity = 59/136 (43.38%), Postives = 77/136 (56.62%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLSPRWSI*PTG 393 E P YLTGE PGDYG+D GLS P F+K + E+IH RW MLGA G + PE F + G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YR+ G ++ D L P S P G Sbjct: 65 EAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLG 199
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 59/136 (43.38%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNGLDLE--DKLSPRWSI*PTG 393 + P YLTGE PGDYG+D GLS P+ F++ + E+IH RWAMLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A++VL+G E YR+ G E DK+ P + P G Sbjct: 64 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLG 198
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLSPRWSI*PTG 393 + P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G NLV A ++A ++VL+G E YR+ G E DK+ P + P G Sbjct: 62 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNP---NLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLG 196
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLSPRWSI*PTG 393 + P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE +K G G EAVWFK GA + L+Y G NLV A ++A ++VL+G E YR+ G E DK+ P + P G Sbjct: 62 QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNP---NLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLG 196
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 59/137 (43.07%), Postives = 80/137 (58.39%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLSPRWSI*PTG 393 E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ NG + ED L P S P G Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLG 200
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.484e-22 Identity = 59/137 (43.07%), Postives = 80/137 (58.39%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRIT-NGL--DLEDKLSPRWSI*PTG 393 E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YR+ NG + ED L P S P G Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLG 200
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.355e-22 Identity = 58/136 (42.65%), Postives = 77/136 (56.62%), Query Frame = 1 Query: 1 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLSPRWSI*PTG 393 E P YL GE GDYG+D GLS P+ F++ + E+IHARWAMLGA G + PE K G G EAVWFK GA + L+Y G + + A+ A ++VL+G E YR+ G ++ D + P S P G Sbjct: 67 ETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLG 201 The following BLAST results are available for this feature:
BLAST of BQ623725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623725 ID=BQ623725; Name=BQ623725; organism=Citrus sinensis; type=EST; length=395bpback to top |