BQ623742

Overview
NameBQ623742
Unique NameBQ623742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 5.147e-15
Identity = 44/88 (50.00%), Postives = 55/88 (62.50%), Query Frame = 1
Query:   13 ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            AT  +R  RD  +    PL IGF+V + HL  I  TG GINPARS G++VI +    + D WIFWVGPFIGAA+A   + FIL   +S
Sbjct:  157 ATTDRRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFILAPRSS 239          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 1
Query:   61 APLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            APL IGF+V + HL  I  TG GINPARS G+AVI +    + D W+FWVGPFIG A+A   + FIL   +S
Sbjct:  170 APLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHN---FQDHWVFWVGPFIGGALAVLIYDFILAPRSS 238          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.956e-14
Identity = 39/71 (54.93%), Postives = 48/71 (67.61%), Query Frame = 1
Query:   64 PLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            PL IGF+V + HL  I  TG GINPARS G++VI +    + D WIFWVGPFIGAA+A   + FIL   +S
Sbjct:  171 PLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFILAPRSS 238          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.656e-13
Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = 1
Query:   61 APLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            APL IG +V + HL  I  TG GINPARS G+AVI +    + + WIFWVGPFIG A+A   + FIL   +S
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFILAPRSS 236          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.656e-13
Identity = 38/72 (52.78%), Postives = 47/72 (65.28%), Query Frame = 1
Query:   61 APLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            APL IG +V + HL  I  TG GINPARS G+AVI +    + + WIFWVGPFIG A+A   + FIL   +S
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFILAPRSS 236          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 1
Query:   61 APLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            APL IG +V + HL  I  TG GINPARS G+AV+    + + + WIFWVGPFIG+A+A   + FIL   +S
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFILAPRSS 236          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 2.162e-13
Identity = 38/71 (53.52%), Postives = 46/71 (64.79%), Query Frame = 1
Query:   64 PLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            PL IG +V + HL  I  TG GINPARS G++VI +  K   D WIFWVGPFIG A+A   + FIL   +S
Sbjct:  171 PLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFK---DHWIFWVGPFIGGALAVLIYDFILAPRSS 238          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.824e-13
Identity = 37/72 (51.39%), Postives = 47/72 (65.28%), Query Frame = 1
Query:   61 APLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASAS 276
            APL IG +V + HL  I  TG GINPARS G+AV+    + + + WIFWVGPFIG A+A   + FIL   +S
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFILAPRSS 236          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 1
Query:   61 APLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILR 264
            APL +G ++   HL  I +TG  +NPARS G AV+ N    W D W++WVGP +GA +AA  ++F+ +
Sbjct:  174 APLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.830e-12
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1
Query:    4 VFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 261
            +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARSL  A++  K   +DD W+FW+GP +GA +A+  + ++L
Sbjct:  145 IFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
The following BLAST results are available for this feature:
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
AQP1_SHEEP5.147e-1550.00Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG1.147e-1454.17Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.956e-1454.93Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB1.656e-1352.78Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN1.656e-1352.78Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_RAT2.162e-1351.39Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA2.162e-1353.52Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.824e-1351.39Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP_HAEIX1.073e-1244.12Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQP2_SHEEP1.830e-1239.53Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00833 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00833 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623742 ID=BQ623742; Name=BQ623742; organism=Citrus sinensis; type=EST; length=518bp
ACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCATGT
TCCTGTCTTGGCACCATTGCCAATTGGATTTGCTGTGTTCATGGTTCACT
TGGCTACGATCTCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTTG
GGAGCTGCGGTGATTTACAACAAGGAGAAGGCTTGGGATGATCAATGGAT
CTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCACC
AATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAGC
TCCTCCAACATTTAATTAACTTTTAAAATAATTACTGGAGGATTAATCAA
TGGCTGTCAAGCGGCTTCGTGACTATGGAATTTGTACATTGTTTTATTTG
CATCAGTATTTAGTAGAGCTGGTGTAGATCCCGCAGCACTTTGTGTGTGT
CTTTTGTTTACCTGAGGACACTCGTTTTTAGTGTGCCCCAAAAATTATTA
TTTGCTTTGCATTCCTTC
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