BQ623742

Overview
NameBQ623742
Unique NameBQ623742
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4610 contig Csv1_Contig4610:676..1193. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.024e-11
Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 1
Query:    4 VFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASA 273
            +F++TD +R            L IGF+V + HL  I  TG  +NPARSL  AV+  K   +DD W+FW+GP +GA I +  + ++L  SA
Sbjct:  145 IFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLLFPSA 227          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 1
Query:    4 VFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 261
            VF++ D + + R    P  A LP+GF++ + HL  I  TG G+NPARS   AVI    + + + W+FW GP +GAA+AA  ++  L
Sbjct:  145 VFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 258
            T+F++ D KR    + V     L IGF+V + HL  I+ TG  +NPARS G AVI      W + WI+WVGP +GA +A   ++++
Sbjct:  173 TIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 1
Query:    1 TVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 258
            T+F++ D KR    + V     L IG +V + HL  I+ TG  +NPARS G AVI      W++ WI+WVGP IGA +A   ++++
Sbjct:  173 TIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 1
Query:    4 VFSATDPKRNARDSHVPVLAP-LPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 261
            VFS+TD +R +     PV +P L IG +V + HL  I  TG  +NPARS G AVI ++  +    W+FWVGP +GAA AA  + ++L
Sbjct:  146 VFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSS--AHWVFWVGPIVGAATAAIIYFYLL 225          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP2_MOUSE (Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.452e-11
Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 1
Query:    4 VFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFIL 261
            +F++TD +R+           L IGF+V + HL  I  TG  +NPARSL  AV+  K   +DD W+FW+GP +GA I +  + ++L
Sbjct:  145 IFASTDERRSDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAVIGSLLYNYLL 223          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   58 LAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIA 237
            +A LPIG ++FM H+A    TGTG+NPARSLGAAV       +   WI+W+GP +GA +A
Sbjct:  204 MAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.888e-11
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 1
Query:   37 RDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIA-AFYHQF 255
            R S +   APL IG ++   HL+ I  TG  +NPARS G AV+      W DQW++WVGP +G  +A A Y  F
Sbjct:  166 RRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLF 236          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1
Query:   10 SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFI 258
            +A DPK+      + V+AP+ IGF V    LA  +  G  +NPA S G AV+      WD+ W++W+GPF+GAAIAA  +  I
Sbjct:  162 TAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237          
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.691e-11
Identity = 28/69 (40.58%), Postives = 42/69 (60.87%), Query Frame = 1
Query:   61 APLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRA 267
            AP+ +G A+   HLA I  TG+ +NPARS G AV  N +  W + W++W GP +G  +A   ++ + RA
Sbjct:  177 APVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
The following BLAST results are available for this feature:
BLAST of BQ623742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
AQP2_RAT2.024e-1140.00Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
MIP_CHICK2.643e-1140.70Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP4_MOUSE2.643e-1140.70Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_BOVIN2.643e-1140.70Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP5_SHEEP3.452e-1144.83Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
AQP2_MOUSE3.452e-1139.53Aquaporin-2 OS=Mus musculus GN=Aqp2 PE=2 SV=2[more]
AQY2_YEAST5.888e-1151.67Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]
AQP_AEDAE5.888e-1144.59Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP12_ORYSJ7.691e-1142.17Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP_CICVR7.691e-1140.58Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00833 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00833 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623742 ID=BQ623742; Name=BQ623742; organism=Citrus sinensis; type=EST; length=518bp
ACTGTTTTCTCCGCCACTGATCCCAAGAGAAATGCTAGGGACTCCCATGT
TCCTGTCTTGGCACCATTGCCAATTGGATTTGCTGTGTTCATGGTTCACT
TGGCTACGATCTCTGTCACTGGAACTGGCATCAACCCCGCTAGAAGTTTG
GGAGCTGCGGTGATTTACAACAAGGAGAAGGCTTGGGATGATCAATGGAT
CTTCTGGGTTGGCCCCTTCATTGGTGCTGCAATTGCTGCATTTTACCACC
AATTCATCCTCAGAGCATCTGCTTCTAAAGCTCTTGGATCCTTCAAAAGC
TCCTCCAACATTTAATTAACTTTTAAAATAATTACTGGAGGATTAATCAA
TGGCTGTCAAGCGGCTTCGTGACTATGGAATTTGTACATTGTTTTATTTG
CATCAGTATTTAGTAGAGCTGGTGTAGATCCCGCAGCACTTTGTGTGTGT
CTTTTGTTTACCTGAGGACACTCGTTTTTAGTGTGCCCCAAAAATTATTA
TTTGCTTTGCATTCCTTC
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