BQ623744
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623744 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.810e-16 Identity = 65/182 (35.71%), Postives = 87/182 (47.80%), Query Frame = 1 Query: 13 TPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND-------LYPGGQYFDPLGLADDPVTFA---ELKVKEIKNGRLAMFSMFGFFVQAIVT 528 +P YLTG PGD G+D GL+ DPE E+++GRWAMLG G + PEV ++ P W+ AG + +Y + S L V+ F +L VE R + G N P G+ P G+ +P+ FA E K KEI NGRLAM + GF +Q VT Sbjct: 62 SPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINV--PKWYAAGKE-------EYFA------SSSTLFVIEF--ILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIF-NPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVT 225 HSP 2 Score: 21.1718 bits (43), Expect = 2.810e-16 Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 2 Query: 533 KVPLENLLDHLENP 574 K P +NLL H+ +P Sbjct: 227 KGPFDNLLQHISDP 240
BLAST of BQ623744 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.459e-15 Identity = 59/144 (40.97%), Postives = 74/144 (51.39%), Query Frame = 1 Query: 97 RNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 528 R R E+IHGRWAMLG LG I E L W AG EG YLG P S+ ++ +V+++G +E R + L +YPGG YFDPLGLA DP LK+ EIK+ RLAM + F +QA T Sbjct: 136 RFRECELIHGRWAMLGTLGAIAVEALTGI--------AWQDAGKVELVEGS-SYLGQPLPF---SLTTLIWIEVLVVGYIEFQRNSELD---PEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFT 263
BLAST of BQ623744 vs. ExPASy Swiss-Prot
Match: LH15_EUGGR (Light-harvesting complex I LH35 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14 Identity = 64/179 (35.75%), Postives = 84/179 (46.93%), Query Frame = 1 Query: 7 AQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGL---VEGFRING--LPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 528 AQ P++LTGE+P D G+D ++ADP +AR R EV H R +ML +G I PE+L K WF+ G + G+ LGF +LM + E +R NG G + YPG FDPL L D +EIKNGRLAM + G Q + T Sbjct: 166 AQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK--------GAWFEVGNSV---DGIK----------------LGF--ILMAIAAPTEYWRGNGGFNWDKGTADRSYPG---FDPLKLTTD------YTKREIKNGRLAMTGLLGLTFQYLAT 306
BLAST of BQ623744 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.095e-14 Identity = 62/185 (33.51%), Postives = 81/185 (43.78%), Query Frame = 1 Query: 10 QTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEK--------WLRVDFKEPVWFKAGAQIFSEGGLDY--------LGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQ 516 Q+P+YL G GD G+D L+ DPE +V++GRWAMLG G + PEVL K WLR+ KE + + + Y + NP V+ I F+ LP G YP G+ F+PL A E K KE+ NGRLAM + GF VQ Sbjct: 41 QSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPI----------------FKSYSLPPHECG---YP-GRVFNPLNFAP-----LENKEKELANGRLAMLAFLGFLVQ 200 HSP 2 Score: 20.7866 bits (42), Expect = 4.095e-14 Identity = 11/25 (44.00%), Postives = 13/25 (52.00%), Query Frame = 2 Query: 500 LGSLSKLL*QAKVPLENLLDHLENP 574 LG L + K P ENL HL +P Sbjct: 195 LGFLVQHNVHGKGPFENLQQHLADP 219
BLAST of BQ623744 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 9.636e-12 Identity = 68/217 (31.34%), Postives = 84/217 (38.71%), Query Frame = 1 Query: 16 PSYLTGEFPGDYGWDTAGLSADPE---------------------------------------------AFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLA-DDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVT 528 P +L G PGD G+D GLS E AR R E+IHGRWAML LG + E W +AG G Y G L SI ++ +V+L+G E +R + YPGG FDPL LA +D LK EIK+ RLAM S FG+ VQA+ T Sbjct: 60 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTG--------VSWVEAGKVELD--GASYAG---LSLPFSITQLIWIEVILVGGAEFYRNSE---TNPEKRCYPGG-VFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALST 259 The following BLAST results are available for this feature:
BLAST of BQ623744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623744 ID=BQ623744; Name=BQ623744; organism=Citrus sinensis; type=EST; length=597bpback to top |