BQ623745

Overview
NameBQ623745
Unique NameBQ623745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10887 contig Csv1_Contig10887:462..968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.572e-37
Identity = 80/144 (55.56%), Postives = 104/144 (72.22%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 433
            +KYGYEMPVDVL + IAD +QVYTQ+A MRPLG   ++++ D E GP ++K DPAG+F G KA S G K  EA ++LEKK K  P  + ++ +Q AIS L SVL  DFK + IE+GVVSK +P FR+L   EI+EHLT I+E+D
Sbjct:  103 YKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK--PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.606e-36
Identity = 77/145 (53.10%), Postives = 104/145 (71.72%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP-AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 433
            +K GY MP DVLAK +A+ +QV TQ A MRPLGV   ++++D+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D       +TV+T I  L S L  DFK++E+++GVV  + P FRVLS+EEI+ HL +I+E+D
Sbjct:  101 YKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKP-FRVLSVEEIEAHLQSIAEKD 244          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.091e-30
Identity = 71/149 (47.65%), Postives = 103/149 (69.13%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKND--PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 433
            +KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+   +S+DEE GP ++K DPAG++ G+KAT+ G K+QE    LE   KK K D     ++++ V+ AI+ +   L  +F  +++EVGV +K+  +F  LS E I+E L AI+E+D
Sbjct:  106 YKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKD--KFFTLSAENIEERLVAIAEQD 252          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.511e-29
Identity = 61/144 (42.36%), Postives = 96/144 (66.67%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 433
            +K GY+MP ++LAK +AD +Q YTQ+A MR LG   + +S D+E GP +++ DPAG++ G K  S G+K+  A +FLEKK+K     T  E ++ AI  LQ+ L  D ++ ++EV VV+K+N +F  L+ ++++ HL  I+ RD
Sbjct:  103 YKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLNQIANRD 246          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.294e-19
Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI--SERD 433
            + YG  + VDVL K I D  QVYTQH  +RP G   ++  +D + G RLF+ DP+G    HKAT+ G   QEA++  E++ + D   T QE ++ A+  L    +E+  A  +E+ VV K+   FR L  ++I+E    +  SE D
Sbjct:  103 YTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED--MTLQEAIELAVRALYEASREETTADNLEIAVVDKQG--FRKLERKKIEEMFERVVGSEED 243          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 3.083e-17
Identity = 51/159 (32.08%), Postives = 88/159 (55.35%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            YG E+ +++LAK I D  Q YTQH  +RP GV  ++  ID+    RLF+ DP+G    +KAT+ G      +  LEK+ ++D   T  E ++ AI+ L     ED K   ++V +++ ++ +F+ + +EEI + +  + ++  E   +   N E  K+K
Sbjct:  104 YGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD--ITLDEGLELAITALTKA-NEDIKPENVDVCIITVKDAQFKKIPVEEIKKLIEKVKKKLNEENKKEEENREETKEK 258          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.692e-15
Identity = 44/138 (31.88%), Postives = 80/138 (57.97%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 421
            YG   P+ V+ K I D  Q++TQ+  +RP G   ++  ++E+  P L++ DP+G +F  KA + G     A+   E+K K+D   + +E ++ AI  L   +++   A  IEV +++ ++ +FR LS EEI+++L  +
Sbjct:  105 YGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD--MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLNEV 237          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15
Identity = 56/149 (37.58%), Postives = 84/149 (56.38%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID--EECG---PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTF--QETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 427
            ++YG  M V VLAK   D +QV TQ A MR +G +   + ++  +E G   P+++  DPAG    H A + G K+ EA  FLEKK KN P  T   +E    A++ LQS L E  +AS +EVG  + ++  F  +S  E+ + LT +++
Sbjct:  100 YRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRVSDREVKKWLTPLAK 247          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.768e-15
Identity = 44/148 (29.73%), Postives = 76/148 (51.35%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSR 451
            Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E + + D        +   +  L    +  F AS +EVG+VS ++ +FR L  EE++ ++  I E+  E  ++
Sbjct:  104 YDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD--MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQILEKHKETENK 248          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.922e-15
Identity = 44/141 (31.21%), Postives = 71/141 (50.35%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 430
            Y   + V+V++K I D  Q YTQ+  +RP G   ++  +D+   PRLF+ DP+G    +KAT+ G      +   E   + D        +   +  L    +  F A  +EVGVVS E+ +FR L  EE++ ++  I E+
Sbjct:  102 YDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239          
The following BLAST results are available for this feature:
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PSA6_DROME1.572e-3755.56Proteasome subunit alpha type-6 OS=Drosophila mela... [more]
PSA6_SCHPO6.606e-3653.10Probable proteasome subunit alpha type-6 OS=Schizo... [more]
PSA6_YEAST1.091e-3047.65Proteasome component C7-alpha OS=Saccharomyces cer... [more]
PSA6_CAEEL3.511e-2942.36Proteasome subunit alpha type-6 OS=Caenorhabditis ... [more]
PSMA_METKA3.294e-1937.67Proteasome subunit alpha OS=Methanopyrus kandleri ... [more]
PSMA_METJA3.083e-1732.08Proteasome subunit alpha OS=Methanocaldococcus jan... [more]
PSMA_PYRHO1.692e-1531.88Proteasome subunit alpha OS=Pyrococcus horikoshii ... [more]
PSA1_TRYBB2.209e-1537.58Proteasome subunit alpha type-1 OS=Trypanosoma bru... [more]
PSMA_METBF3.768e-1529.73Proteasome subunit alpha OS=Methanosarcina barkeri... [more]
PSMA_METAC4.922e-1531.21Proteasome subunit alpha OS=Methanosarcina acetivo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00836 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00836 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623745 ID=BQ623745; Name=BQ623745; organism=Citrus sinensis; type=EST; length=507bp
CTTCAAATATGGATATGAAATGCCTGTGGATGTGTTAGCCAAATGGATTG
CAGACAAATCACAAGTATATACTCAACATGCTTATATGAGACCACTTGGT
GTAGTTGCTATGGTTTTGAGTATTGACGAAGAATGTGGACCTCGCCTCTT
TAAGTGTGACCCTGCTGGCCATTTCTTTGGCCACAAGGCAACAAGTGCTG
GATTGAAGGAGCAAGAGGCAATTAATTTCTTGGAGAAGAAGATGAAGAAT
GATCCTGCGTTTACCTTTCAAGAAACTGTGCAGACTGCAATTTCCACCCT
GCAATCAGTCCTGCAAGAGGATTTTAAGGCGAGTGAGATTGAGGTTGGCG
TGGTGAGCAAGGAGAATCCAGAATTCAGAGTTTTGTCCATCGAGGAGATC
GATGAGCACTTGACTGCTATAAGTGAACGAGATTAGGAGGTGGTTTCACG
CCCCATCATAAATGCTGAAACCAAAAAACAAAAATGCTTTTCCCTGTATC
TTGAATT
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