BQ623745

Overview
NameBQ623745
Unique NameBQ623745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10887 contig Csv1_Contig10887:462..968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 412
            Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:  105 YDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 412
            Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:  105 YDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 412
            Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:  105 YDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 42/137 (30.66%), Postives = 73/137 (53.28%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 412
            Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:  105 YDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 46/153 (30.07%), Postives = 78/153 (50.98%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D++  PRL++ DP+G +   KA + G   +    FLEK    D   +  E ++ AI  L  V+Q   K   IE+ ++ +  P  ++ S +E++ ++T I +   E        AE KK K
Sbjct:  106 VEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQSGGK--NIELAIIRRNQP-LKMFSAKEVELYVTEIEKEKEE--------AEKKKSK 247          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 2.701e-13
Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 424
            Y   +P   L + +A   Q YTQ   +RP GV  ++   DE+  P LF+ DP+G +F  KAT+ G        FLEK+   D     ++ + TAI TL+   +       IEVG+ ++    FR LS  E+ ++L AI+
Sbjct:  101 YQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDED-RPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNED--LELEDAIHTAILTLKESFEGQMTEENIEVGICNEAG--FRRLSPAEVKDYLAAIA 234          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEE 397
            Y   + +D L K ++D  Q+YTQH  +RP GV  ++  ID    P+L   +P+G F  + A + G     A  + EK  + D     Q+T+   I  L S L+  E    S IEVG    ++  FR +S EE
Sbjct:  105 YDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED--LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 43/137 (31.39%), Postives = 72/137 (52.55%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 412
            Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+LF  +P+G +  ++A + G     A  FLEK  K D     +ET+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:  105 YDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LNVEETILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTNEDKNMYL 238          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +    FLEK   ++   T   T++  I  L  V+Q   K   IE+ V+ ++ P  ++L+ EEI+E++  I +   E         E KKQK
Sbjct:  104 VEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP-LKILNPEEIEEYVAEIEKEKEE--------NEKKKQK 245          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.527e-13
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +    FLEK   +D   T   T++  I  L  V+Q   K   IE+ V+ ++ P  ++L+ EEI++++  I +   E         E KKQK
Sbjct:  104 VEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP-LKILNPEEIEKYVAEIEKEKEE--------NEKKKQK 245          
The following BLAST results are available for this feature:
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PSMA_SULIM2.701e-1330.66Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIL2.701e-1330.66Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIK2.701e-1330.66Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIA2.701e-1330.66Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSA7L_MACFA2.701e-1330.07Proteasome subunit alpha type-7-like OS=Macaca fas... [more]
PSA2_CARAU2.701e-1333.81Proteasome subunit alpha type-2 OS=Carassius aurat... [more]
PSMA_SULTO3.527e-1333.33Proteasome subunit alpha OS=Sulfolobus tokodaii GN... [more]
PSMA_SULSO3.527e-1331.39Proteasome subunit alpha OS=Sulfolobus solfataricu... [more]
PSA7_PONAB3.527e-1331.37Proteasome subunit alpha type-7 OS=Pongo abelii GN... [more]
PSA7_MOUSE3.527e-1331.37Proteasome subunit alpha type-7 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00836 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00836 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623745 ID=BQ623745; Name=BQ623745; organism=Citrus sinensis; type=EST; length=507bp
CTTCAAATATGGATATGAAATGCCTGTGGATGTGTTAGCCAAATGGATTG
CAGACAAATCACAAGTATATACTCAACATGCTTATATGAGACCACTTGGT
GTAGTTGCTATGGTTTTGAGTATTGACGAAGAATGTGGACCTCGCCTCTT
TAAGTGTGACCCTGCTGGCCATTTCTTTGGCCACAAGGCAACAAGTGCTG
GATTGAAGGAGCAAGAGGCAATTAATTTCTTGGAGAAGAAGATGAAGAAT
GATCCTGCGTTTACCTTTCAAGAAACTGTGCAGACTGCAATTTCCACCCT
GCAATCAGTCCTGCAAGAGGATTTTAAGGCGAGTGAGATTGAGGTTGGCG
TGGTGAGCAAGGAGAATCCAGAATTCAGAGTTTTGTCCATCGAGGAGATC
GATGAGCACTTGACTGCTATAAGTGAACGAGATTAGGAGGTGGTTTCACG
CCCCATCATAAATGCTGAAACCAAAAAACAAAAATGCTTTTCCCTGTATC
TTGAATT
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