BQ623745

Overview
NameBQ623745
Unique NameBQ623745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10887 contig Csv1_Contig10887:462..968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.750e-12
Identity = 47/153 (30.72%), Postives = 78/153 (50.98%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +    FLEK   ++   T   T++  I  L  V+Q   K   IE+ V+ ++ P  ++L+ EEI+ ++  I +   E         E KKQK
Sbjct:  104 VEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP-LKILNPEEIERYVAEIEKEKEE--------NEKKKQK 245          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.286e-12
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 430
            YG  + V+ LAK I D  Q YTQH   RP G+  ++  ID     RLF+ DP+G    +KAT+ G     A+  LE K   D      E ++ A+  L S   E+ K   I++ +V         +S++EI++ + A+ ++
Sbjct:  105 YGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMIVSEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKK 241          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.286e-12
Identity = 46/153 (30.07%), Postives = 77/153 (50.33%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +    FLEK   ++   +  + ++ AI  L  V+Q   K   IE+ V+ +  P  ++L  +EI+  +  I +   E        AE KKQK
Sbjct:  106 VEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEVVQSGGK--NIELAVIRRNQP-LKILESKEIETLVAEIEKEKEE-------EAEKKKQK 248          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 2.286e-12
Identity = 45/153 (29.41%), Postives = 77/153 (50.33%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D++   RL++ DP+G +   KA + G   +    FLEK    D   +  E ++ AI  L  V+Q   K   IE+ ++ +  P  ++ S +E++ ++T I +   E        AE KK K
Sbjct:  112 VEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGK--NIELAIIRRNQP-LKMFSAKEVELYVTEIEKEKEE--------AEKKKSK 253          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12
Identity = 46/150 (30.67%), Postives = 72/150 (48.00%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVV--------------SKENPEFRVLSIEEIDEHLT 415
            Y    P  +L + +A   Q  TQ   +RP GV  ++   DE  GP L++ DP+G +F  KAT+ G     A  FLEK+         ++ V  A+ TL+  ++ +     IE+G+V                + P FR LS +EI+++LT
Sbjct:  101 YNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWDEG-GPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTE--GLELEDAVHIALLTLKETIEGEMNGDTIEIGIVGPPADHLLGVEGVEGAKGPRFRKLSPQEIEDYLT 247          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA1_CHICK (Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12
Identity = 42/145 (28.97%), Postives = 71/145 (48.97%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 430
            F +   +PV  L   I  K+Q+ TQ    RP GV  ++   D+  GP +F+  P+ ++F  KA S G + Q A N+LE+ M         E V+  +  L+  L  ++D     + +G+V K+  EF +   +++   L  + ER
Sbjct:   96 FVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDD-MGPHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-MEFTIYDDDDVAPFLEGLEER 238          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 42/138 (30.43%), Postives = 73/138 (52.90%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 421
            YG  +P+ VL K I D  Q +TQ+  +RP G   ++  ++E+  P LF+ DP+G +F  KA + G     A+   E+  ++D      + ++ AI  L   L+E   A  IEV  ++ +   ++ L  EE++++L  I
Sbjct:  105 YGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD--IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 39/135 (28.89%), Postives = 68/135 (50.37%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 412
            Y   + V+ LAK I D  Q+YTQH  +RP G   ++  ++   G RLF+ DP+G    +KAT+ G     A+   EKK  +D      + ++ A+  +    +       +E+ V+   + ++R L  +EI +H+
Sbjct:  104 YNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD--MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHV 235          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 427
            Y   + V++LAK + D  Q YTQ    RP G   ++  + +    RLF+ DP+G    +KAT  G      I   E + + D  F+    ++  I  L +  +     S IE+GVVS E  EFR +  +E+  ++    E
Sbjct:  104 YNEPINVEILAKKLCDHMQTYTQFGGARPYGTALLIAGVSDG-EARLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFS--GAIRLGIKALHAATEGKLDVSAIEIGVVSIETGEFRKMEKDEVKAYVDQFEE 240          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.093e-12
Identity = 45/153 (29.41%), Postives = 76/153 (49.67%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +    FLEK   ++   T   T++  I  L  V+Q   K  E+    V + +   ++L+ EEI++++  I +   E         E KKQK
Sbjct:  104 VEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIEL---AVMRRDQSLKILNPEEIEKYVAEIEKEKEE--------NEKKKQK 245          
The following BLAST results are available for this feature:
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PSA7A_XENLA1.750e-1230.72Proteasome subunit alpha type-7-A OS=Xenopus laevi... [more]
PSMA_METM62.286e-1231.91Proteasome subunit alpha OS=Methanococcus maripalu... [more]
PSA7_CARAU2.286e-1230.07Proteasome subunit alpha type-7 OS=Carassius aurat... [more]
PSA7L_HUMAN2.286e-1229.41Proteasome subunit alpha type-7-like OS=Homo sapie... [more]
PSA2_NEUCR3.900e-1230.67Probable proteasome subunit alpha type-2 OS=Neuros... [more]
PSA1_CHICK3.900e-1228.97Proteasome subunit alpha type-1 OS=Gallus gallus G... [more]
PSMA_THEK15.093e-1230.43Proteasome subunit alpha OS=Thermococcus sp. (stra... [more]
PSMA_METTH5.093e-1228.89Proteasome subunit alpha OS=Methanobacterium therm... [more]
PSMA_METMJ5.093e-1230.00Proteasome subunit alpha OS=Methanoculleus marisni... [more]
PSA7_HUMAN5.093e-1229.41Proteasome subunit alpha type-7 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00836 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00836 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623745 ID=BQ623745; Name=BQ623745; organism=Citrus sinensis; type=EST; length=507bp
CTTCAAATATGGATATGAAATGCCTGTGGATGTGTTAGCCAAATGGATTG
CAGACAAATCACAAGTATATACTCAACATGCTTATATGAGACCACTTGGT
GTAGTTGCTATGGTTTTGAGTATTGACGAAGAATGTGGACCTCGCCTCTT
TAAGTGTGACCCTGCTGGCCATTTCTTTGGCCACAAGGCAACAAGTGCTG
GATTGAAGGAGCAAGAGGCAATTAATTTCTTGGAGAAGAAGATGAAGAAT
GATCCTGCGTTTACCTTTCAAGAAACTGTGCAGACTGCAATTTCCACCCT
GCAATCAGTCCTGCAAGAGGATTTTAAGGCGAGTGAGATTGAGGTTGGCG
TGGTGAGCAAGGAGAATCCAGAATTCAGAGTTTTGTCCATCGAGGAGATC
GATGAGCACTTGACTGCTATAAGTGAACGAGATTAGGAGGTGGTTTCACG
CCCCATCATAAATGCTGAAACCAAAAAACAAAAATGCTTTTCCCTGTATC
TTGAATT
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