BQ623745

Overview
NameBQ623745
Unique NameBQ623745
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10887 contig Csv1_Contig10887:462..968. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.301e-11
Identity = 44/142 (30.99%), Postives = 72/142 (50.70%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASE----IEVGVVSKENPEFRVLSIEEIDEHLT 415
            F Y   MPV+ L + + D  Q YTQ   +RP GV  +    D+  G +L+  DP+G++ G KAT+ G   Q A + L++  K+D   T ++ V+ A+  L   +      SE     EV ++     +++V S E ++  LT
Sbjct:   99 FSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDD--VTREDAVKLALKALSKTMDSTSLTSEKLELAEVYLLPSGKVKYQVHSPESLNRLLT 238          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.301e-11
Identity = 44/138 (31.88%), Postives = 67/138 (48.55%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 421
            Y   +PV  L + +A   Q YTQ   +RP GV  ++   D +  P L++ DP+G +F  KAT+ G        FLEK+   D      + V TAI TL+   +    A  IE+G+  +    F+ L    I ++L +I
Sbjct:  101 YKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDND-RPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEKRYSED--LELDDAVHTAILTLKEGFEGKMTADNIEIGICDQNG--FQRLDPASIKDYLASI 233          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA1_RAT (Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.301e-11
Identity = 40/145 (27.59%), Postives = 70/145 (48.28%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 430
            F +   +PV  L   I  K+Q+ TQ    RP GV  ++   D+  GP +F+  P+ ++F  +A S G + Q A  +LE+ M         E V+  +  L+  L  ++D     + +G+V K+  EF +   +++   L  + ER
Sbjct:   97 FVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDD-MGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIYDDDDVSPFLDGLEER 239          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA1_PONAB (Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.312e-11
Identity = 40/145 (27.59%), Postives = 70/145 (48.28%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 430
            F +   +PV  L   I  K+Q+ TQ    RP GV  ++   D+  GP +F+  P+ ++F  +A S G + Q A  +LE+ M         E V+  +  L+  L  ++D     + +G+V K+  EF +   +++   L  + ER
Sbjct:   97 FVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDD-MGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIHDDDDVSPFLEGLEER 239          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.631e-11
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEID 403
            V+ + ++IA   Q YTQ   +RP G+  +++  D     P L++ DP+G F   KA + G        FLEK  K       QETV+ AI  L  V++   K   IEV V+++E    + L  EEID
Sbjct:  105 VEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAG---QETVKLAIRALLEVVESGGK--NIEVAVMTREEGVLKQLEEEEID 226          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.631e-11
Identity = 43/145 (29.66%), Postives = 70/145 (48.28%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 430
            + +  + P+ +LA  +  K Q + Q A  RP GV  ++   D + GPRL++  P+G  F  KAT+ GL+ Q A  +LE+  +  PA    E V  A+  L +      +       + +V K  P F +L+ EE  ++L     R
Sbjct:   98 YMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQ-GPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGFPACDLDELVMHALRALGAATSGGVELNIKNTTIAIVGKGTP-FTILTEEEARKYLDGFKTR 240          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.354e-11
Identity = 45/127 (35.43%), Postives = 65/127 (51.18%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEID 403
            V+ + ++IA   Q YTQ   +RP G+  +++  D   G P L++ DP+G F   KA + G        FLEK  K       QETV+ AI  L  V++   K   IEV V++KE+   + L   EID
Sbjct:  105 VEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSG---QETVKLAIRALLEVVESGGK--NIEVAVMTKEH-GLKQLEEAEID 225          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.354e-11
Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 2
Query:    8 YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 421
            Y   MP+  L + I+   Q +TQ   +RP G   +V   D   G  L++ DP+G F+  KATS G    +A  FLEK+  N+     ++ V TA+ TL+        A   +VG V +    F +L++E++ ++L  I
Sbjct:   99 YHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSR-GNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNE--MEIEDAVHTALLTLKEGFDGRMTAENTQVGRVVE--GRFELLTVEQLKDYLDQI 231          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.605e-11
Identity = 45/153 (29.41%), Postives = 75/153 (49.02%), Query Frame = 2
Query:   26 VDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 484
            V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +      EK   ++   T   T++  I  L  V+Q   K   IE+ V+ ++ P   + S EEI++++  I +   E         E KKQK
Sbjct:  104 VEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQPLKILTSPEEIEKYVAEIEKEKEE--------NEKKKQK 246          
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 9.605e-11
Identity = 44/140 (31.43%), Postives = 71/140 (50.71%), Query Frame = 2
Query:    2 FKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASE-IEVGVV--SKENPEFRVLSIEEIDEHL 412
            F Y   MPV+ L + + D  Q YTQ+  + P GV  +    D+  G +LF  DP+G++ G KA + G   Q A + L++  K+D   T +E VQ A+  L   +      SE +E+  V  S    +++  S E+++  L
Sbjct:   99 FSYQEPMPVEQLVQSLCDTKQGYTQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDD--ITREEAVQLALKVLSKTMDSTSLTSEKLELAEVFLSNGKVKYQACSPEKLNSML 236          
The following BLAST results are available for this feature:
BLAST of BQ623745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PSA4_SPIOL3.301e-1130.99Proteasome subunit alpha type-4 OS=Spinacia olerac... [more]
PSA2_DROME3.301e-1131.88Proteasome subunit alpha type-2 OS=Drosophila mela... [more]
PSA1_RAT3.301e-1127.59Proteasome subunit alpha type-1 OS=Rattus norvegic... [more]
PSA1_PONAB4.312e-1127.59Proteasome subunit alpha type-1 OS=Pongo abelii GN... [more]
PSA7A_ARATH5.631e-1134.65Proteasome subunit alpha type-7-A OS=Arabidopsis t... [more]
PSA1_TRYBR5.631e-1129.66Proteasome subunit alpha type-1 OS=Trypanosoma bru... [more]
PSA7_SOLLC7.354e-1135.43Proteasome subunit alpha type-7 OS=Solanum lycoper... [more]
PSA2_TRYBB7.354e-1131.88Proteasome subunit alpha type-2 OS=Trypanosoma bru... [more]
PSA7_CHICK9.605e-1129.41Proteasome subunit alpha type-7 OS=Gallus gallus G... [more]
PSA4_PETHY9.605e-1131.43Proteasome subunit alpha type-4 OS=Petunia hybrida... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00836 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00836 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623745 ID=BQ623745; Name=BQ623745; organism=Citrus sinensis; type=EST; length=507bp
CTTCAAATATGGATATGAAATGCCTGTGGATGTGTTAGCCAAATGGATTG
CAGACAAATCACAAGTATATACTCAACATGCTTATATGAGACCACTTGGT
GTAGTTGCTATGGTTTTGAGTATTGACGAAGAATGTGGACCTCGCCTCTT
TAAGTGTGACCCTGCTGGCCATTTCTTTGGCCACAAGGCAACAAGTGCTG
GATTGAAGGAGCAAGAGGCAATTAATTTCTTGGAGAAGAAGATGAAGAAT
GATCCTGCGTTTACCTTTCAAGAAACTGTGCAGACTGCAATTTCCACCCT
GCAATCAGTCCTGCAAGAGGATTTTAAGGCGAGTGAGATTGAGGTTGGCG
TGGTGAGCAAGGAGAATCCAGAATTCAGAGTTTTGTCCATCGAGGAGATC
GATGAGCACTTGACTGCTATAAGTGAACGAGATTAGGAGGTGGTTTCACG
CCCCATCATAAATGCTGAAACCAAAAAACAAAAATGCTTTTCCCTGTATC
TTGAATT
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