BQ623756

Overview
NameBQ623756
Unique NameBQ623756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9356 contig Csv1_Contig9356:199..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.790e-33
Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            SFK E   E+R  ES  I  KY DR+PVI E+  K D+P+++KKK+LVP D++VGQF++++  R+ L+P KA+FVFVK+TLP TA+LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.790e-33
Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            SFK E   E+R  ES  I  KY DR+PVI E+  K D+P+++KKK+LVP D++VGQF++++  R+ L+P KA+FVFVK+TLP TA+LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.279e-32
Identity = 63/113 (55.75%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            SFK E   E+R  E+  I  KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+  KA+F+FVK+TLP TA LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.279e-32
Identity = 63/113 (55.75%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            SFK E   E+R  E+  I  KYPDR+PVI E+  ++D+PD++KKK+LVP D++VGQF++++  R+ L+  KA+F+FVK+TLP TA LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_SCHPO (Autophagy-related protein 8 OS=Schizosaccharomyces pombe GN=atg8 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.670e-32
Identity = 60/112 (53.57%), Postives = 86/112 (76.79%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKD+F+FE+R  ES+ I  KYPDR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+F+ + LP TA LM ++YE  K EDGFLY+ YS E TFG
Sbjct:    5 FKDDFSFEKRKTESQRIREKYPDRIPVICEKVDKSDIAAIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFIDEILPPTAALMSTIYEEHKSEDGFLYITYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_USTMA (Autophagy-related protein 8 OS=Ustilago maydis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.181e-32
Identity = 60/113 (53.10%), Postives = 85/113 (75.22%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            +FK+E +FE+R  E+  I  KYPDR+PVI E+  + D+P ++KKK+LVP D++VGQF++++  R+ L P KA+F+FV + LP TA LM ++YE  KDEDGFLY+ YS E TFG
Sbjct:    4 AFKNEHSFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPATAALMSAIYEEHKDEDGFLYVSYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_LACBI (Autophagy-related protein 8 OS=Laccaria bicolor GN=ATG8 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.181e-32
Identity = 61/114 (53.51%), Postives = 83/114 (72.81%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFGYE 415
            FKDE  FE+R  E+  I  KYPDR+PVI E+  + D+P ++KKK+LVP D++VGQF++++  R+ L P KA+F+FV + LP TA LM ++YE  KDED FLY+ YS E TFG E
Sbjct:    5 FKDEHPFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPPTAALMSAIYEEHKDEDNFLYVSYSGENTFGQE 118          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.181e-32
Identity = 62/112 (55.36%), Postives = 84/112 (75.00%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  FE+R  E+  I AKY DR+PVI E+  K+D+  ++KKK+LVP D++VGQF++++  R+ L+P KA+F+FV + LP TA LM S+YE  KDEDGFLY+ YS E TFG
Sbjct:    5 FKDEHPFEKRKAEAERIRAKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_CRYNE (Autophagy-related protein 8 OS=Cryptococcus neoformans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.848e-32
Identity = 61/112 (54.46%), Postives = 84/112 (75.00%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  F++R  E+  I  KY DR+PVI E+  K+D+P ++KKK+LVP D++VGQF++++  R+ L P KA+F+FV D LP TA LM S+Y+  KDEDGFLY+ Y+SE TFG
Sbjct:    6 FKDEHPFDKRKAEAERIRQKYQDRIPVICEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLAPEKAIFIFVDDILPPTAALMSSIYDEHKDEDGFLYVLYASENTFG 117          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.848e-32
Identity = 64/113 (56.64%), Postives = 85/113 (75.22%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            SFK     E R+ ES  I AKYP+RVPVI E+  ++D+PD++KKK+LVP D+++GQF++++  R+ L   KA+FVFVK+TLP TA LM ++YE  KDEDGFLYM YS E TFG
Sbjct:    5 SFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117          
The following BLAST results are available for this feature:
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8A_ORYSJ9.790e-3357.52Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8A_ORYSI9.790e-3357.52Autophagy-related protein 8A OS=Oryza sativa subsp... [more]
ATG8C_ORYSJ1.279e-3255.75Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8C_ORYSI1.279e-3255.75Autophagy-related protein 8C OS=Oryza sativa subsp... [more]
ATG8_SCHPO1.670e-3253.57Autophagy-related protein 8 OS=Schizosaccharomyces... [more]
ATG8_USTMA2.181e-3253.10Autophagy-related protein 8 OS=Ustilago maydis GN=... [more]
ATG8_LACBI2.181e-3253.51Autophagy-related protein 8 OS=Laccaria bicolor GN... [more]
ATG8_EMENI2.181e-3255.36Autophagy-related protein 8 OS=Emericella nidulans... [more]
ATG8_CRYNE2.848e-3254.46Autophagy-related protein 8 OS=Cryptococcus neofor... [more]
ATG8B_ARATH2.848e-3256.64Autophagy-related protein 8b OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00847 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00847 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623756 ID=BQ623756; Name=BQ623756; organism=Citrus sinensis; type=EST; length=596bp
GGGGTAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAATTGAGACGATA
CGGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACATTCGAGCAA
AGACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGATCGAGTCCC
CGTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATATGGAAAAGA
AAAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTTATTCACATT
TTAAGCAGCAGGCTTCACCTGACCCCTGGAAAAGCTCTCTTTGTATTTGT
GAAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAGTCTATGAAT
CCTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGCAGTGAGAAA
ACCTTTGGTTATGAAAGAATTCAGACTTGTTAATACTTGAACTTTGTTCA
TGGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGTGAAATGATG
TATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCTTAGTCTTAT
TCTGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGATATAA
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