BQ623756

Overview
NameBQ623756
Unique NameBQ623756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9356 contig Csv1_Contig9356:199..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_YEAST (Autophagy-related protein 8 OS=Saccharomyces cerevisiae GN=ATG8 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.149e-31
Identity = 57/113 (50.44%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            +FK E+ FE+R  ES  I  ++ +R+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ L P KA+F+FV DTLP TA LM ++Y+  KD+DGFLY+ YS E TFG
Sbjct:    4 TFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_YEAS7 (Autophagy-related protein 8 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.149e-31
Identity = 57/113 (50.44%), Postives = 86/113 (76.11%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            +FK E+ FE+R  ES  I  ++ +R+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ L P KA+F+FV DTLP TA LM ++Y+  KD+DGFLY+ YS E TFG
Sbjct:    4 TFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.149e-31
Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  FE+R  E+  I  K+ DR+PVI E+  ++D+P+++K+K+LVP D++VGQF++++  R+ L   KA+F+FV D LP TA+LM ++YE +KDEDGFLY+ YS E TFG
Sbjct:    5 FKDEHPFERRKAEASRIRGKFLDRIPVICEKVEESDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_PICST (Autophagy-related protein 8 OS=Pichia stipitis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.041e-30
Identity = 58/115 (50.43%), Postives = 84/115 (73.04%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFGYER 418
            FKDE  FE+R  E+  I  ++ DRVPVI E+   +D+P+++K+K+LVP D+SVGQF++++  R+ L   KA+F+FV D LP TA L+ ++YE  KDEDGFLY+ YS E TFG ++
Sbjct:    5 FKDEHPFEKRQAEATRIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLSVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFGQKK 119          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_PICPA (Autophagy-related protein 8 OS=Pichia pastoris GN=ATG8 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.666e-30
Identity = 58/112 (51.79%), Postives = 82/112 (73.21%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  FE+R  E+  I  K+ DR+PVI E+  K+D+P+++K+K+LVP D++VGQF++++  R+ +   KA+F+F+ D LP TA LM  VYE  KDEDGFLY+ YS E TFG
Sbjct:    5 FKDEHPFEKRKAEAMRIRYKFADRIPVICEKVEKSDIPEVDKRKYLVPCDLTVGQFVYVIRKRIKIPSEKAIFIFIDDILPPTAALMSKVYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8F_ARATH (Autophagy-related protein 8f OS=Arabidopsis thaliana GN=ATG8F PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.666e-30
Identity = 59/114 (51.75%), Postives = 82/114 (71.93%), Query Frame = 2
Query:   71 SFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFGY 412
            SFK E   E+R  E+  I  KYPDR+PVI E+  K+D+P ++KKK+LVP D++VGQF++++  R+ L+  KA+F+FV + LP    LM SVYE  KD+DGFLY+ YS E TFG+
Sbjct:    5 SFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFGF 118          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8E_ARATH (Autophagy-related protein 8e OS=Arabidopsis thaliana GN=ATG8E PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.666e-30
Identity = 62/122 (50.82%), Postives = 86/122 (70.49%), Query Frame = 2
Query:   56 MGKMQSFKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFGYERI 421
            M K   FK +  FE+R  E+  I  KYPDR+PVI E+  K+++P+++KKK+LVP D++VGQF++++  R+ L+  KA+F+FV + LP T  LM SVYE  KDEDGFLY+ YS E TFG   I
Sbjct:    1 MNKGSIFKMDDDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGASSI 122          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_CANAL (Autophagy-related protein 8 OS=Candida albicans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.757e-30
Identity = 57/112 (50.89%), Postives = 82/112 (73.21%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  FE+R  E+  I  ++ DRVPVI E+   +D+P+++K+K+LVP D++VGQF++++  R+ L   KA+F+FV D LP TA L+ ++YE  KDEDGFLY+ YS E TFG
Sbjct:    5 FKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDEDGFLYVLYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_LODEL (Autophagy-related protein 8 OS=Lodderomyces elongisporus GN=ATG8 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.728e-29
Identity = 56/112 (50.00%), Postives = 82/112 (73.21%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  FE+R  E+  I  ++ DRVPVI E+   +D+P+++K+K+LVP D++VGQF++++  R+ L   KA+F+FV D LP TA L+ ++YE  KD+DGFLY+ YS E TFG
Sbjct:    5 FKDEHPFEKRQAEAARIAQRFKDRVPVICEKVENSDIPEIDKRKYLVPVDLTVGQFVYVIRKRIKLPSEKAIFIFVNDILPPTAALISTIYEEHKDDDGFLYVLYSGENTFG 116          
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.850e-29
Identity = 56/112 (50.00%), Postives = 81/112 (72.32%), Query Frame = 2
Query:   74 FKDEFTFEQRLEESREIIAKYPDRVPVIAERYSKADLPDMEKKKFLVPRDMSVGQFIHILSSRLHLTPGKALFVFVKDTLPQTATLMDSVYESFKDEDGFLYMCYSSEKTFG 409
            FKDE  FE+R  E+  I  ++ DR+PVI E+   +D+ +++K+K+LVP D+SVGQF++++  R+ L   KA+F+F+ D LP TA LM ++YE  KDEDGFLY+ YS E TFG
Sbjct:    5 FKDEHPFEKRKAEATRITQRFNDRLPVICEKAENSDIQEIDKRKYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of BQ623756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
ATG8_YEAST3.149e-3150.44Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_YEAS73.149e-3150.44Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_PICAN3.149e-3151.79Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_PICST2.041e-3050.43Autophagy-related protein 8 OS=Pichia stipitis GN=... [more]
ATG8_PICPA2.666e-3051.79Autophagy-related protein 8 OS=Pichia pastoris GN=... [more]
ATG8F_ARATH2.666e-3051.75Autophagy-related protein 8f OS=Arabidopsis thalia... [more]
ATG8E_ARATH2.666e-3050.82Autophagy-related protein 8e OS=Arabidopsis thalia... [more]
ATG8_CANAL7.757e-3050.89Autophagy-related protein 8 OS=Candida albicans GN... [more]
ATG8_LODEL1.728e-2950.00Autophagy-related protein 8 OS=Lodderomyces elongi... [more]
ATG8_DEBHA3.850e-2950.00Autophagy-related protein 8 OS=Debaryomyces hansen... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00847 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00847 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623756 ID=BQ623756; Name=BQ623756; organism=Citrus sinensis; type=EST; length=596bp
GGGGTAGTTCAGCCGTTTGGGTTTCTCTTTCCTTGAGAATTGAGACGATA
CGGAGATGGGAAAGATGCAATCTTTCAAGGACGAGTTCACATTCGAGCAA
AGACTTGAAGAATCGCGCGAAATCATTGCGAAATACCCCGATCGAGTCCC
CGTAATTGCGGAAAGATATTCAAAAGCTGACCTTCCTGATATGGAAAAGA
AAAAATTTCTGGTTCCTCGGGACATGTCTGTTGGGCAATTTATTCACATT
TTAAGCAGCAGGCTTCACCTGACCCCTGGAAAAGCTCTCTTTGTATTTGT
GAAAGATACTTTACCGCAAACAGCGACTTTAATGGACTCAGTCTATGAAT
CCTTCAAGGATGAGGATGGATTCCTGTATATGTGCTACAGCAGTGAGAAA
ACCTTTGGTTATGAAAGAATTCAGACTTGTTAATACTTGAACTTTGTTCA
TGGCTGTGTGCTACTGTGCTTTACATGCCACTCCTTGTTGTGAAATGATG
TATATAACTCAGCATGGCCATTGATGTTGTATTATCTGTCTTAGTCTTAT
TCTGCAGATTGTTTAAACATCAGAAATGTCTCGTGTGTGGATATAA
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