BQ623771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 1.986e-30 Identity = 53/94 (56.38%), Postives = 70/94 (74.47%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET-QGTKLKDF 384 +NHL+LV+L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F ++L V+I+ +T LK+F Sbjct: 355 DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEF 448 HSP 2 Score: 45.4394 bits (106), Expect = 1.986e-30 Identity = 17/34 (50.00%), Postives = 27/34 (79.41%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE+K YQ QV++NC + L+E+GY++V+GG+ Sbjct: 321 TPEFKEYQRQVVANCRALSAALVELGYKIVTGGS 354
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 4.385e-30 Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTK--LKDFV 387 +NHL+LV+L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+ + G K LK+F+ Sbjct: 355 DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQ-DAVGVKATLKEFM 449 HSP 2 Score: 45.4394 bits (106), Expect = 4.385e-30 Identity = 17/34 (50.00%), Postives = 27/34 (79.41%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE++AYQ QV++NC A+ L+ +GY +V+GG+ Sbjct: 321 TPEFRAYQRQVVANCRALAEALMGLGYRVVTGGS 354
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 4.385e-30 Identity = 54/96 (56.25%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTK--LKDFV 387 +NHL+LV+L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+ + G K LK+F+ Sbjct: 355 DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQ-DAVGVKATLKEFM 449 HSP 2 Score: 45.4394 bits (106), Expect = 4.385e-30 Identity = 17/34 (50.00%), Postives = 27/34 (79.41%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE++AYQ QV++NC A+ L+ +GY +V+GG+ Sbjct: 321 TPEFRAYQRQVVANCRALAEALMGLGYRVVTGGS 354
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.136e-29 Identity = 49/84 (58.33%), Postives = 69/84 (82.14%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE 357 + HL+L+NL N IDG+R+E +LE ++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF ++FA+VA + D AVKLA+ IKS+ Sbjct: 370 DTHLILINLSNLGIDGARLETLLENINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFGPQEFAQVAAYIDRAVKLAIGIKSQ 453 HSP 2 Score: 41.5874 bits (96), Expect = 2.136e-29 Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE+K YQ V+ N F + L++ G+ELVSGGT Sbjct: 336 TPEFKEYQAAVVENARIFGEELVKKGFELVSGGT 369
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.137e-29 Identity = 50/85 (58.82%), Postives = 67/85 (78.82%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET 360 +NHL+LV+L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F ++L ++I+S+T Sbjct: 355 DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDT 439 HSP 2 Score: 42.3578 bits (98), Expect = 2.137e-29 Identity = 16/34 (47.06%), Postives = 26/34 (76.47%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 T E+K YQ QV++NC ++ L E+GY++V+GG+ Sbjct: 321 TLEFKVYQHQVVANCRALSEALTELGYKIVTGGS 354
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.137e-29 Identity = 50/85 (58.82%), Postives = 67/85 (78.82%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSET 360 +NHL+LV+L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +E+DF KVA+F ++L ++I+S+T Sbjct: 355 DNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDT 439 HSP 2 Score: 42.3578 bits (98), Expect = 2.137e-29 Identity = 16/34 (47.06%), Postives = 26/34 (76.47%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 T E+K YQ QV++NC ++ L E+GY++V+GG+ Sbjct: 321 TLEFKVYQHQVVANCRALSEALTELGYKIVTGGS 354
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 4.716e-29 Identity = 54/95 (56.84%), Postives = 72/95 (75.79%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDF 384 +NHL+L++L++K DG R EKVLEA IA NKNT PGD SA+ P G+R+GTPALTSRG +EEDF KVA+F ++L ++I+S T+ T LK+F Sbjct: 349 DNHLILMDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHMATKAT-LKEF 442 HSP 2 Score: 41.9726 bits (97), Expect = 4.716e-29 Identity = 17/34 (50.00%), Postives = 25/34 (73.53%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 T E+K YQ QVL+NC + L E+GY++V+GG+ Sbjct: 315 TTEFKIYQLQVLANCRALSDALTELGYKIVTGGS 348
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 4.717e-29 Identity = 51/95 (53.68%), Postives = 73/95 (76.84%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDF 384 ++H+VLV+LK+K+IDG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF K+ + D AV A +++S+ KLKDF Sbjct: 347 DSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDF 441 HSP 2 Score: 40.0466 bits (92), Expect = 4.717e-29 Identity = 18/34 (52.94%), Postives = 21/34 (61.76%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE+K YQEQVL N + GY+LVS GT Sbjct: 313 TPEFKEYQEQVLKNAKALESEFTKKGYKLVSDGT 346
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 107.457 bits (267), Expect = 6.135e-29 Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDF 384 +NHLVLV+L+ K +DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F D V + +++KS+T KL+DF Sbjct: 378 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKSKT--AKLQDF 468 HSP 2 Score: 40.4318 bits (93), Expect = 6.135e-29 Identity = 19/34 (55.88%), Postives = 21/34 (61.76%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TP ++ Y QVL N A LLE GY LVSGGT Sbjct: 344 TPMFREYSLQVLKNARAMADALLERGYSLVSGGT 377
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYM_RABIT (Serine hydroxymethyltransferase, mitochondrial OS=Oryctolagus cuniculus GN=SHMT2 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.295e-28 Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDF 384 +NHLVLV+L+ K +DG+R E+VLE V I ANKNT PGD SA+ PGG+R+G PALTSR F E+DF +V F D V + +++K +T KL+DF Sbjct: 378 DNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKT--AKLQDF 468 HSP 2 Score: 40.4318 bits (93), Expect = 2.295e-28 Identity = 19/34 (55.88%), Postives = 21/34 (61.76%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TP ++ Y QVL N A LLE GY LVSGGT Sbjct: 344 TPMFREYSLQVLKNARAMADALLERGYSLVSGGT 377 The following BLAST results are available for this feature:
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623771 ID=BQ623771; Name=BQ623771; organism=Citrus sinensis; type=EST; length=405bpback to top |