BQ623771
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.895e-27 Identity = 51/98 (52.04%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKS---ETQGTKLKDFVA 390 + HLVLV+L +K +DG+RVE++LE V+I+ANKNTVPGD SA++P G+R+GTPA T+RGF E+DF +V D V L KI + +K +DF A Sbjct: 346 DTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDFKA 443 HSP 2 Score: 40.817 bits (94), Expect = 1.895e-27 Identity = 18/34 (52.94%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE+ YQ+ VLSN A + GY+LVSGGT Sbjct: 312 TPEFYQYQKDVLSNAKAMANAFITRGYKLVSGGT 345
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.895e-27 Identity = 50/97 (51.55%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVA 390 ++H+VLV+L+ K +DG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF ++ + D AVK A + +S + KLKDF A Sbjct: 346 DSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLPKEANKLKDFKA 442 HSP 2 Score: 37.7354 bits (86), Expect = 1.895e-27 Identity = 17/34 (50.00%), Postives = 19/34 (55.88%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE+K YQ QVL N +GY LVS GT Sbjct: 312 TPEFKEYQTQVLKNAKALENEFQTLGYRLVSNGT 345
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 1.199e-26 Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATT 396 +NHL+LV+L+ ++G+R E +L+ HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV F V++A K +E G LKDF A T Sbjct: 384 DNHLLLVDLRPIGVEGARAEHILDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFKEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKAFT 479 HSP 2 Score: 31.5722 bits (70), Expect = 1.199e-26 Identity = 13/32 (40.62%), Postives = 19/32 (59.38%), Query Frame = 3 Query: 9 EYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 ++ Y EQ+L N A+ L + GY L +GGT Sbjct: 352 DFVQYGEQILKNAKTLAERLKKHGYSLATGGT 383
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.560e-26 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDFVATTQS 402 +NHL+LV+L+ ++G+R E VL+ HIA NKNT PGDVSA+ PGGIR+GTPALTSRGF E+DF KV F V++A K +E G LKDF + T++ Sbjct: 380 DNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEA-GKTLKDFKSFTET 477 HSP 2 Score: 30.8018 bits (68), Expect = 1.560e-26 Identity = 13/32 (40.62%), Postives = 19/32 (59.38%), Query Frame = 3 Query: 9 EYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 ++ Y EQVL N A+ + + GY L +GGT Sbjct: 348 DFVQYGEQVLKNAKTLAERMKKHGYALATGGT 379
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 5.831e-26 Identity = 45/84 (53.57%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE 357 + HL+L++L IDGSR+E +LE ++IAANKNT+PGD SA+ P G+R+GTPA+T+RGF +F +VA + + AVKLA+ +KS+ Sbjct: 369 DTHLLLIDLSPMGIDGSRLETILERLNIAANKNTIPGDKSALYPSGLRVGTPAMTTRGFGPAEFGRVAAYINEAVKLAIGLKSQ 452 HSP 2 Score: 38.891 bits (89), Expect = 5.831e-26 Identity = 17/34 (50.00%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE+K YQ V+ N F + L + G+ LVSGGT Sbjct: 335 TPEFKNYQTAVVENAKVFGEELSKRGFSLVSGGT 368
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.888e-26 Identity = 48/100 (48.00%), Postives = 74/100 (74.00%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVATTQ 399 ++H+VLV+L+ K +DG+RVE V E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDFA++ + + AV++A I+ + +LKDF A + Sbjct: 346 DSHMVLVSLREKGVDGARVEHVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFARIVGYINRAVEIARSIQQSLPKEANRLKDFKAKVE 445 HSP 2 Score: 33.4982 bits (75), Expect = 9.888e-26 Identity = 15/34 (44.12%), Postives = 19/34 (55.88%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 TPE++ YQE VL N ++ Y LVS GT Sbjct: 312 TPEFREYQELVLKNAKVLETEFKKLNYRLVSDGT 345
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.379e-24 Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVA 390 ++H+VLV++K+K +DG+R E+VLE ++I NKNTVP D SA P GIR+GTPA+T+RGF E+DF +V + D A+ A ++ E KLKDF A Sbjct: 340 DSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKA 436 HSP 2 Score: 30.4166 bits (67), Expect = 1.379e-24 Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 3 Query: 6 PEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 P YK YQ QV+ N + + GY+L + GT Sbjct: 307 PAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGT 339
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_NEUCR (Serine hydroxymethyltransferase, cytosolic OS=Neurospora crassa GN=for PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 5.046e-23 Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 1 Query: 16 KPIKSKF*AIARNLHRLCSRWAMNLFLVEPENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVA 390 K + K A A+ L + L ++H+VLV+L+ +DG+RVE +LE ++I NKN VPGD SA+ PGG+R+GTPA+TSRGF E DF KVA F D AVKL +I++ + K KDF A Sbjct: 317 KEYQQKVVANAKALEKKLKELGYKLVSDGTDSHMVLVDLRPIGVDGARVEFLLEQINITCNKNAVPGDKSALTPGGLRIGTPAMTSRGFGEADFEKVAVFVDEAVKLCKEIQASLPKEANKQKDFKA 443
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.312e-23 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 1 Query: 106 ENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSETQGTKLKDF 384 +NHLVL +L+ + I GS++EK + HI NKN V GD +A+ PGG+R+G PALTSRG E+DF KV F D VK+++ I+S+ G K+ DF Sbjct: 360 DNHLVLWDLRPQGITGSKIEKACDEAHITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKV-GKKMPDF 451 HSP 2 Score: 29.261 bits (64), Expect = 9.312e-23 Identity = 12/34 (35.29%), Postives = 20/34 (58.82%), Query Frame = 3 Query: 3 TPEYKAYQEQVLSNCSKFAQTLLEMGYELVSGGT 104 +P+++ Y +QV N + L + GY LV+ GT Sbjct: 326 SPDFQEYTKQVRRNSQTMGEELKKRGYSLVTEGT 359
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 3.616e-21 Identity = 54/133 (40.60%), Postives = 88/133 (66.17%), Query Frame = 1 Query: 1 LLQSIKPIKSKF*AIARNL-HRLCSRWAMNLFLVEPENHLVLVNLKNKRIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLAVKIKSE--TQGTKLKDFVA 390 +L++ K ++S+F +NL +RL S ++H+VLV+L+ K +DG+RVE + E ++IA NKN++PGD SA+VPGG+R+G PA+T+RG EEDF ++ + + AV+ A +++ +LKDF A Sbjct: 322 VLKNAKALESEF----KNLGYRLVSNGT--------DSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKA 442 The following BLAST results are available for this feature:
BLAST of BQ623771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623771 ID=BQ623771; Name=BQ623771; organism=Citrus sinensis; type=EST; length=405bpback to top |