BQ623772

Overview
NameBQ623772
Unique NameBQ623772
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:714..1063. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623772 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:    1 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 105
            TPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  476 TPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of BQ623772 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:    1 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 105
            TPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  476 TPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of BQ623772 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.033e-12
Identity = 33/35 (94.29%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:    1 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 105
            TPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  476 TPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
[Close]
BLAST of BQ623772 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.174e-11
Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:    1 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 105
            TPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  477 TPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
[Close]
BLAST of BQ623772 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.174e-11
Identity = 31/35 (88.57%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:    1 TPVVNALSKQRAMLENILRACVGLAPENNMILEYK 105
            TPV+NALSKQRAMLENI+RACVGLAPENNMI+E+K
Sbjct:  477 TPVINALSKQRAMLENIMRACVGLAPENNMIMEFK 511
The following BLAST results are available for this feature:
BLAST of BQ623772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
INO1_ORYSJ4.033e-1294.29Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_MAIZE4.033e-1294.29Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_HORVU4.033e-1294.29Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_PHAVU1.174e-1188.57Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH1.174e-1188.57Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00863 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00863 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623772 ID=BQ623772; Name=BQ623772; organism=Citrus sinensis; type=EST; length=350bp
ACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATGCTTGAGAACAT
TCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACATGATTTTGGAAT
ACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACCGGTATTCCCTT
TCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATTACTGATTGTAA
TGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTCCTGTATGTTTGCT
CTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCATTGCCTTTGTAG
CTCATTTCGGAGCATGCAATCTCTTGTATTGCAAGTAGATAATATATTGG
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