BQ623775

Overview
NameBQ623775
Unique NameBQ623775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_PICAN (Autophagy-related protein 8 OS=Pichia angusta GN=ATG8 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.750e-39
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 3
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EA RIR K+ DRIPVI EK E SDIP IDK+KYLVP+DLTVGQFVYVIRKRI+L +EKAIFIFV+++LPPT ++MSTIY++ KDEDGFLY+ YSGENTFG
Sbjct:   17 EASRIRGKFLDRIPVICEKVEESDIPEIDKRKYLVPSDLTVGQFVYVIRKRIQLPSEKAIFIFVNDILPPTASLMSTIYEQYKDEDGFLYILYSGENTFG 116          

HSP 2 Score: 23.8682 bits (50), Expect = 1.750e-39
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FE+R+A
Sbjct:    2 RSQFKDEHPFERRKA 16          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_DEBHA (Autophagy-related protein 8 OS=Debaryomyces hansenii GN=ATG8 PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 2.958e-39
Identity = 75/100 (75.00%), Postives = 88/100 (88.00%), Query Frame = 3
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            EA RI +++ DR+PVI EKAE SDI  IDK+KYLVP DL+VGQFVYVIRKRIKL +EKAIFIF++++LPPT A+MSTIY+E KDEDGFLYV YSGENTFG
Sbjct:   17 EATRITQRFNDRLPVICEKAENSDIQEIDKRKYLVPGDLSVGQFVYVIRKRIKLPSEKAIFIFINDILPPTAALMSTIYEEHKDEDGFLYVLYSGENTFG 116          

HSP 2 Score: 25.0238 bits (53), Expect = 2.958e-39
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2
Query:   32 KSNFKIEHEFEKRRA 76
            +S FK EH FEKR+A
Sbjct:    2 RSQFKDEHPFEKRKA 16          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_YEAST (Autophagy-related protein 8 OS=Saccharomyces cerevisiae GN=ATG8 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.868e-39
Identity = 80/116 (68.97%), Postives = 94/116 (81.03%), Query Frame = 3
Query:   30 VKATSRLSMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            +K+T +      K   E+ERI +++ +RIPVI EKAE+SDIP IDK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MS IY E KD+DGFLYVTYSGENTFG
Sbjct:    1 MKSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_YEAS7 (Autophagy-related protein 8 OS=Saccharomyces cerevisiae (strain YJM789) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.868e-39
Identity = 80/116 (68.97%), Postives = 94/116 (81.03%), Query Frame = 3
Query:   30 VKATSRLSMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            +K+T +      K   E+ERI +++ +RIPVI EKAE+SDIP IDK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MS IY E KD+DGFLYVTYSGENTFG
Sbjct:    1 MKSTFKSEYPFEKRKAESERIADRFKNRIPVICEKAEKSDIPEIDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAIYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_VANPO (Autophagy-related protein 8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG8 PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.597e-39
Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 3
Query:   30 VKATSRLSMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            +K++ +      K   E+ERI EK+ +RIPVI EKAE+SDIP IDK+KYLVP+DLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT A+MS +Y E KD+DGFLYVTYSGENTFG
Sbjct:    1 MKSSFKSEYPFEKRKTESERITEKFQNRIPVICEKAEKSDIPEIDKRKYLVPSDLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTAALMSAVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_CANGA (Autophagy-related protein 8 OS=Candida glabrata GN=ATG8 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.125e-38
Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = 3
Query:   30 VKATSRLSMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            +K++ +      K   E+ERI EK+ +RIPVI EKAE+SDIP +DK+KYLVPADLTVGQFVYVIRKRI L  EKAIFIFV++ LPPT ++MS +Y E KD+DGFLYVTYSGENTFG
Sbjct:    1 MKSSFKSEYPFEKRKAESERISEKFQNRIPVICEKAEKSDIPEVDKRKYLVPADLTVGQFVYVIRKRIMLPPEKAIFIFVNDTLPPTASLMSQVYQEHKDKDGFLYVTYSGENTFG 116          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_ASHGO (Autophagy-related protein 8 OS=Ashbya gossypii GN=ATG8 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 5.927e-37
Identity = 71/100 (71.00%), Postives = 87/100 (87.00%), Query Frame = 3
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            E+ERI  ++ +R+PVI E+AE+SDIP +D++KYLVPADLTVGQFVYVIR+RIKL AEKAIFIFV++ LPPT A+M  +Y E KD+DGFLYV YSGENTFG
Sbjct:   16 ESERICSQFENRVPVICERAEKSDIPEVDRRKYLVPADLTVGQFVYVIRRRIKLPAEKAIFIFVNDTLPPTAALMFAVYQEHKDKDGFLYVKYSGENTFG 115          

HSP 2 Score: 22.7126 bits (47), Expect = 5.927e-37
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2
Query:   35 SNFKIEHEFEKRRA 76
            S+FK E+ FEKR+A
Sbjct:    2 SSFKSEYPFEKRKA 15          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_DICDI (Autophagy-related protein 8 OS=Dictyostelium discoideum GN=atg8 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.065e-37
Identity = 75/100 (75.00%), Postives = 87/100 (87.00%), Query Frame = 3
Query:   81 AERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRI-KLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            AERIR KY DRIPVIVEKA RSD P IDKKKYLVPAD+TVG+FVY IRK + K+SAEKAI++FV+N +PPT A++S IY+  KDEDGFLY+TYSGENTFG
Sbjct:   20 AERIRSKYLDRIPVIVEKAPRSDAPDIDKKKYLVPADITVGKFVYEIRKHMTKVSAEKAIYLFVNNTIPPTAALISQIYERYKDEDGFLYITYSGENTFG 119          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8_KLULA (Autophagy-related protein 8 OS=Kluyveromyces lactis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.797e-36
Identity = 75/116 (64.66%), Postives = 92/116 (79.31%), Query Frame = 3
Query:   30 VKATSRLSMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            +K+  +      K   E+ERI +K+ +RIPVI E+  +SDIP IDK+KYLVP DLTVGQFVYVIRKRIKL AEKAIFIFV++ LPPT A+MS+IY + KD+DGFLYV+YS ENTFG
Sbjct:    1 MKSAFKSEFPFEKRKAESERIVQKFHNRIPVICERGGKSDIPDIDKRKYLVPGDLTVGQFVYVIRKRIKLPAEKAIFIFVNDTLPPTAALMSSIYQQHKDKDGFLYVSYSSENTFG 116          
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: GBRL2_RAT (Gamma-aminobutyric acid receptor-associated protein-like 2 OS=Rattus norvegicus GN=Gabarapl2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.506e-32
Identity = 63/100 (63.00%), Postives = 81/100 (81.00%), Query Frame = 3
Query:   78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377
            E+ +IR KYPDR+PVIVEK   S I  IDK+KYLVP+D+TV QF+++IRKRI+L +EKAIF+FVD  +P +   M  +Y+++KDEDGFLYV YSGENTFG
Sbjct:   17 ESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116          
The following BLAST results are available for this feature:
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_PICAN1.750e-3976.00Autophagy-related protein 8 OS=Pichia angusta GN=A... [more]
ATG8_DEBHA2.958e-3975.00Autophagy-related protein 8 OS=Debaryomyces hansen... [more]
ATG8_YEAST3.868e-3968.97Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_YEAS73.868e-3968.97Autophagy-related protein 8 OS=Saccharomyces cerev... [more]
ATG8_VANPO6.597e-3968.10Autophagy-related protein 8 OS=Vanderwaltozyma pol... [more]
ATG8_CANGA1.125e-3867.24Autophagy-related protein 8 OS=Candida glabrata GN... [more]
ATG8_ASHGO5.927e-3771.00Autophagy-related protein 8 OS=Ashbya gossypii GN=... [more]
ATG8_DICDI8.065e-3775.00Autophagy-related protein 8 OS=Dictyostelium disco... [more]
ATG8_KLULA1.797e-3664.66Autophagy-related protein 8 OS=Kluyveromyces lacti... [more]
GBRL2_RAT3.506e-3263.00Gamma-aminobutyric acid receptor-associated protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00866 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00866 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623775 ID=BQ623775; Name=BQ623775; organism=Citrus sinensis; type=EST; length=582bp
ATATTATATATGATAATTAACGACAATGAGTAAAAGCAACTTCAAGATTG
AGCATGAATTCGAGAAAAGGCGTGCCTGAGGCGGAAAGAATTAGGGAGAA
ATACCCAGATAGAATTCCGGTGATAGTGGAAAAGGCTGAGAGAAGTGATA
TTCCTACAATTGACAAGAAAAAATATTTAGTCCCTGCTGACTTAACAGTG
GGTCAGTTTGTGTATGTGATACGGAAGAGAATTAAACTGAGCGCAGAAAA
GGCAATCTTTATATTTGTGGACAATGTTCTCCCGCCTACAGGAGCAATAA
TGTCTACCATATATGATGAAAAGAAGGATGAAGATGGGTTTCTCTATGTT
ACTTACAGTGGTGAAAACACATTTGGATAGCATAATCTGCCGCTACCCTT
TTTCCTCTACCAACGTTTCGTTTGTTAATCTACTCATCTTGAATTTAGTG
TTTCTGTTTTCTGGCTTTGTGCCGGTCATAATCCGGCTTCTTATTTACAT
GACCTTTTATGCTTGTATATAGCCGGTTCAAACTATGTGGGATCAGACTG
ATGATTGCGAATAATTTAAATTCGATGGAAGT
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