BQ623775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8D_ORYSJ (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica GN=ATG8D PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 8.365e-26 Identity = 53/101 (52.48%), Postives = 75/101 (74.26%), Query Frame = 3 Query: 78 EAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSTIYDEKKDE-DGFLYVTYSGENTFG 377 E+ + YPDRIPVIVEK RS++P ++K+KYLVP ++ VGQF++++R R+ LS A+F+FV+N LP T +M ++Y+ KDE DGFLY+ YS E TFG Sbjct: 18 ESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQFIFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.179e-25 Identity = 57/113 (50.44%), Postives = 82/113 (72.57%), Query Frame = 3 Query: 51 SMNSRKGVPEAERIREKYPDRIPVIVEKAERSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLS---AEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 S+ RK + + +IR +Y DR+P+IVE+A SD+P I+KKK+L P+++ + F+ IRK + S +KAIF+FV+ N LPP+ ++S+IYD KDEDGFLY+ YSGENTFG Sbjct: 13 SLEKRKLI--SSKIRNRYKDRLPIIVERAANSDVPDINKKKFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFG 123
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18 Identity = 47/102 (46.08%), Postives = 70/102 (68.63%), Query Frame = 3 Query: 78 EAERIREKYPDRIPVIVEKAERSD-IPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDN-VLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 E IR K+P++IPV+VE+ R +P +DK K+LVP +LT+ QF+ +IR R+ L A +A ++ V+N L A M+ IY + KDEDGF+Y+TY+ + TFG Sbjct: 25 EVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3A_BOVIN (Microtubule-associated proteins 1A/1B light chain 3A OS=Bos taurus GN=MAP1LC3A PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.270e-17 Identity = 39/102 (38.24%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 78 EAERIREKYPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 E ++IRE++P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IY+++KDEDGFLY+ Y+ + TFG Sbjct: 19 EVQQIREQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.211e-16 Identity = 39/104 (37.50%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 72 VPEAERIREKYPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 V + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + +S +Y+ +KDEDGFLY+ Y+ + TFG Sbjct: 17 VEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFG 120
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.065e-16 Identity = 38/102 (37.25%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 78 EAERIREKYPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 E ++IR+++P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IY+++KDEDGFLY+ Y+ + TFG Sbjct: 19 EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.065e-16 Identity = 38/102 (37.25%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 78 EAERIREKYPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 E ++IR+++P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IY+++KDEDGFLY+ Y+ + TFG Sbjct: 19 EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.065e-16 Identity = 38/102 (37.25%), Postives = 71/102 (69.61%), Query Frame = 3 Query: 78 EAERIREKYPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 E ++IR+++P +IPVI+E+ + +P +DK K+LVP + + + V +IR+R++L+ +A F+ V+ + + ++ IY+++KDEDGFLY+ Y+ + TFG Sbjct: 19 EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 2.697e-16 Identity = 38/104 (36.54%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 72 VPEAERIREKYPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 V + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + +S +Y+ ++DEDGFLY+ Y+ + TFG Sbjct: 17 VEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 2.697e-16 Identity = 38/104 (36.54%), Postives = 70/104 (67.31%), Query Frame = 3 Query: 72 VPEAERIREKYPDRIPVIVEKAE-RSDIPTIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVD-NVLPPTGAIMSTIYDEKKDEDGFLYVTYSGENTFG 377 V + IRE++P +IPVI+E+ + +P +DK K+LVP + + + + +IR+R++L+A +A F+ V+ + + +S +Y+ ++DEDGFLY+ Y+ + TFG Sbjct: 17 VEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120 The following BLAST results are available for this feature:
BLAST of BQ623775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623775 ID=BQ623775; Name=BQ623775; organism=Citrus sinensis; type=EST; length=582bpback to top |