BQ623780

Overview
NameBQ623780
Unique NameBQ623780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.094e-24
Identity = 57/139 (41.01%), Postives = 88/139 (63.31%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGP--VLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFT-TMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCS 410
            +G +++LVYEYM + SLD  LF +     L+W+ R++I  G  RG+ YLH      IIH D+K  NILL      KI+DFG+++    +Q+   T  + GT GY+ PE++ N   S K+DVYSFG+++LE++ G+++ S
Sbjct:  400 EGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSS 538          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.653e-24
Identity = 57/143 (39.86%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   15 RLLVYEYMNHGSLDRILFG--NGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLF--------TTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSP 413
            +LL Y+Y+ +GSL   L G   G  ++W+ R+D+ LG A  LAYLH  C   IIH D+K  N+LL  HF+  ++DFGL++ ++   ++            M G+ GY+APE  +   I+EK+DVYS+G+VLLE+++G+    P
Sbjct:  827 KLLFYDYLPNGSLSSRLHGAGKGGCVDWEARYDVVLGVAHALAYLHHDCLPTIIHGDVKAMNVLLGPHFEPYLADFGLARTISGYPNTGIDLAKPTNRPPMAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGKHPLDP 969          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.653e-24
Identity = 62/140 (44.29%), Postives = 86/140 (61.43%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGN--GPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLL-TPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNC-SPRSQSH 428
            L+YE++  G L + L G   G  + W  R  IAL  A GL YLHSGC   I+H DIK  NILL    +AK++DFGLS+      ++ + T + GT GYL PE+   + + EK+DVYSFG+VLLE+++ +      RS+SH
Sbjct:  650 LIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQSRSKSH 789          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.653e-24
Identity = 65/138 (47.10%), Postives = 85/138 (61.59%), Query Frame = 3
Query:    6 GRQRLLVYEYMNHGSLDRILFGNGPVLE----WQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSS--LFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            G +RLLVYE+M HGSL + L G  P L+    W  R  IA+  ARG+ YLH      +IH DIK  NIL+     A+++DFGLS +L P  S   L     GT GYL PE+     ++ K+DVYSFG+VLLE++SGR+
Sbjct:  573 GSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLS-ILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRK 709          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 8.689e-24
Identity = 61/138 (44.20%), Postives = 90/138 (65.22%), Query Frame = 3
Query:   18 LLVYEYMNHGSLDRILFG--NGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQS 425
            +LVYE++ +G L + L    +  ++ W+ R  IA+  A  L+YLHS     I H DIK  NILL   +Q K+SDFG S+ +T +Q+ L T + GT GY+ PE+  +S  ++K+DVYSFG+VL+EL++G +N S R QS
Sbjct:  494 VLVYEFVPNGDLCKRLRDECDDYIMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITG-KNPSSRVQS 630          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.689e-24
Identity = 68/207 (32.85%), Postives = 103/207 (49.76%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV----LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFT-TMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEKLVCIAL 608
            +G +++LVYE++ + SLD  LF   P+    L+W  R +I  G  RG+ YLH      IIH D+K  NILL      KI+DFGL++     Q+   T  + GT GY+ PE++ N   S K+DVYSFG+++LE++ G++N S                       ++         +   G  LEL DP +      +EV + + I L
Sbjct:  428 EGEEKILVYEFVPNKSLDHFLFD--PIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSS-----------------FHQIDGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGL 615          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.689e-24
Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSL-DRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQ---SSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            +R+LVYEYM +GSL D +       L WQ R  IAL  ARG+ YLH      +IH DIK  NILL   + AK+SDFGLS++   E+   S L     GT GY+ PE+     ++ K+DVYSFG+VLLEL+SG +
Sbjct:  523 ERILVYEYMKNGSLADHLHNPQFDPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVSDFGLSQMGPTEEDDVSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLSGHK 656          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.135e-23
Identity = 62/137 (45.26%), Postives = 91/137 (66.42%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV---LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKL-LTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            +   RLLVYE+M  GSL+  LF  G     L W  R ++AL  A+GLA+LHS    K+I+ DIK  NILL   + AK+SDFGL++     + S + T + GT GY APE++++  ++ ++DVYSFG++LLE++SG+R
Sbjct:  142 EDEHRLLVYEFMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSD-PVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKR 277          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 62/134 (46.27%), Postives = 86/134 (64.18%), Query Frame = 3
Query:    6 GRQRLLVYEYMNHGSLDRILFGN-GPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMR-GTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            G +RLLVYEYM++ SL+  LF      L W++R +I LG A GL YLH   + K+I+ D K  N+LL   F  K+SDFGL++      ++  TT R GT GY APE++    +  K+DVYSFG+VL E+++GRR
Sbjct:  163 GIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYLH---DLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRR 293          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 58/131 (44.27%), Postives = 82/131 (62.60%), Query Frame = 3
Query:    9 RQRLLVYEYMNHGSLDRILFGNGPV--LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSG 395
            R   LVYEYM  GSL ++L  +     L+W +R ++  G A  L+Y+H      I+H DI   NILL   ++AKISDFG +KLL P+ SS ++ + GT GY+APE      ++EK DVYSFG++ LE++ G
Sbjct:  847 RNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDISSGNILLGEDYEAKISDFGTAKLLKPD-SSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKG 976          
The following BLAST results are available for this feature:
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
CRK16_ARATH5.094e-2441.01Putative cysteine-rich receptor-like protein kinas... [more]
Y4265_ARATH6.653e-2439.86Probable LRR receptor-like serine/threonine-protei... [more]
PAM74_ARATH6.653e-2444.29Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE6.653e-2447.10Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
WAKLD_ARATH8.689e-2444.20Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
CRK21_ARATH8.689e-2432.85Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
ACCR4_ARATH8.689e-2447.76Serine/threonine-protein kinase-like protein CCR4 ... [more]
BIK1_ARATH1.135e-2345.26Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
Y5707_ARATH1.482e-2346.27Probable receptor-like protein kinase At5g47070 OS... [more]
Y4885_ARATH1.482e-2344.27Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00871 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00871 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623780 ID=BQ623780; Name=BQ623780; organism=Citrus sinensis; type=EST; length=610bp
CTCAAGGGAGACAACGCCTACTGGTATATGAGTATATGAATCACGGCTCA
CTGGACCGTATCCTCTTTGGAAATGGTCCTGTCTTGGAATGGCAAGAGAG
GTTTGATATAGCACTGGGAACTGCTCGGGGGCTTGCATATTTGCACAGTG
GTTGTGAACAAAAGATCATTCATTGTGATATCAAACCAGAAAACATTCTC
TTGCACTATCATTTTCAGGCAAAGATATCTGATTTTGGGCTCTCAAAGCT
TCTAACTCCTGAGCAGTCTAGTCTGTTCACAACAATGAGAGGCACTCGTG
GCTACCTTGCACCTGAATGGCTTACAAACTCTGCAATATCAGAAAAAACT
GATGTTTATAGTTTTGGAATGGTACTGCTTGAACTTGTGAGTGGGAGGAG
AAATTGCTCACCACGATCACAAAGTCATAGCATGGATAGTAATAGTAGTG
GGGTTCCCTCTTCATCGTCGTCAGCCTCAGCACTTGTTTATTTTCCACTA
TTGGCATTGGAAATGCACGAGCAAGGAAAGTACTTGGAGCTGGCTGACCC
AAGATTAGAAGGCAGAGTTACAAATGAGGAGGTGGAAAAATTAGTGTGTA
TTGCTTTGTG
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