BQ623780

Overview
NameBQ623780
Unique NameBQ623780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.027e-29
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILF--GNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            +G + LLVYEY+ + SLD+ LF      VL W +R +I LGTA GLAYLH G   +IIH DIK  N+LL      KI+DFGL++    +++ L T + GT GY+APE++    ++EK DVYSFG+++LE+  G R
Sbjct:  380 EGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTR 514          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.259e-29
Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSLDRILFGNGPV--LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCS 410
            +R+LVYEYM++GSL   L G+     L+W  R  IA   A+GL YLH+GC   IIH D+K  NILL  + +AK+SDFGLS+    + + + +  +GT GYL PE+  +  ++EK+DVYSFG+VL EL+SG++  S
Sbjct:  674 RRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVS 808          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.869e-29
Identity = 69/140 (49.29%), Postives = 90/140 (64.29%), Query Frame = 3
Query:   15 RLLVYEYMNHGSLDRILF---GNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRN---CSPR 416
            +LL+Y YM++GSLD  L       P L+W+ R  IA G A GLAYLH  CE  I+H DIK  NILL   F A ++DFGL++L+ P  + + T + GT GY+ PE+   S  + K DVYSFG+VLLEL++GRR    C PR
Sbjct:  812 KLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPR 951          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29
Identity = 65/138 (47.10%), Postives = 91/138 (65.94%), Query Frame = 3
Query:    6 GRQRLLVYEYMNHGSLDRILF-----GNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRN 404
            G ++LLVYEYM  G+L R LF     G  P+L W++R  +AL  ARG+ YLH    Q  IH D+KP NILL    +AK++DFGL +L    + S+ T + GT GYLAPE+     ++ K DVYSFG++L+EL++GR++
Sbjct:  656 GNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLL-WKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKS 792          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28
Identity = 56/136 (41.18%), Postives = 94/136 (69.12%), Query Frame = 3
Query:   18 LLVYEYMNHGSLDRILFGNGPVL----EWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSP 413
            +L+YEYM +GSLD +L G    +    EW   + IA+G A+G+ YLH  C+  I+H D+KP NILL   F+A+++DFG++KL+  ++S   + + G+ GY+APE+     + +K+D+YS+G++LLE+++G+R+  P
Sbjct:  795 MLLYEYMPNGSLDDLLHGGDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDES--MSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEP 928          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28
Identity = 67/137 (48.91%), Postives = 93/137 (67.88%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSLDRIL---FGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSP 413
            ++LLVYEYM +GSLD  L    G   VL+W +R  IA+G ARGLA+LH G    IIH DIK  NILL   F+ K++DFGL++L++  +S + T + GT GY+ PE+  ++  + K DVYSFG++LLELV+G+    P
Sbjct:  985 EKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGP 1121          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28
Identity = 64/139 (46.04%), Postives = 93/139 (66.91%), Query Frame = 3
Query:   18 LLVYEYMNHGSLDRILFGN--GPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSH 428
            LL Y+YM +GSL  +L G+     L+W+ R  IA+G A+GLAYLH  C  +IIH DIK  NILL  +F+A +SDFG++K +   ++   T + GT GY+ PE+   S I+EK+D+YSFG+VLLEL++G++     +  H
Sbjct:  718 LLFYDYMENGSLWDLLHGSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDNEANLH 856          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28
Identity = 63/135 (46.67%), Postives = 91/135 (67.41%), Query Frame = 3
Query:    6 GRQRLLVYEYMNHGSLDRILFGNGPV--LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRN 404
            G + LLVYEY+ + SL   LF    V  L W +RF I LGTA G+AYLH     +IIH DIK  NILL   F  +I+DFGL++L   +++ + T + GT GY+APE++    ++EK DVYSFG++++E+++G+RN
Sbjct:  389 GPESLLVYEYIANQSLHDYLFVRKDVQPLNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRN 523          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 125.946 bits (315), Expect = 1.530e-28
Identity = 66/140 (47.14%), Postives = 95/140 (67.86%), Query Frame = 3
Query:   15 RLLVYEYMNHGSLDRILF--GNGP-VLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR---NCSPR 416
            RLL+Y YM +GSLD  L    +GP +L+W+ R  IA G A+GL YLH GC+  I+H DIK  NILL  +F + ++DFGL++L++P ++ + T + GT GY+ PE+   S  + K DVYSFG+VLLEL++ +R    C P+
Sbjct:  803 RLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPK 942          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.998e-28
Identity = 66/135 (48.89%), Postives = 91/135 (67.41%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSLDRILF----GNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKL--LTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGR 398
            + +LVYEYM HG+L   LF     + P L W+ R +I +G ARGL YLH+G +  IIH DIK  NILL  +F AK+SDFGLS++   +  Q+ + T ++GT GYL PE+     ++EK+DVYSFG+VLLE++  R
Sbjct:  594 EMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCR 728          
The following BLAST results are available for this feature:
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
CRK42_ARATH4.027e-2947.41Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y1677_ARATH5.259e-2947.41Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA6.869e-2949.29Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
TMK1_ARATH8.971e-2947.10Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5148_ARATH1.172e-2841.18Probable leucine-rich repeat receptor-like protein... [more]
EXS_ARATH1.172e-2848.91Leucine-rich repeat receptor protein kinase EXS OS... [more]
ERL1_ARATH1.172e-2846.04LRR receptor-like serine/threonine-protein kinase ... [more]
CRK3_ARATH1.172e-2846.67Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
PSKR1_ARATH1.530e-2847.14Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y5389_ARATH1.998e-2848.89Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00871 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00871 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623780 ID=BQ623780; Name=BQ623780; organism=Citrus sinensis; type=EST; length=610bp
CTCAAGGGAGACAACGCCTACTGGTATATGAGTATATGAATCACGGCTCA
CTGGACCGTATCCTCTTTGGAAATGGTCCTGTCTTGGAATGGCAAGAGAG
GTTTGATATAGCACTGGGAACTGCTCGGGGGCTTGCATATTTGCACAGTG
GTTGTGAACAAAAGATCATTCATTGTGATATCAAACCAGAAAACATTCTC
TTGCACTATCATTTTCAGGCAAAGATATCTGATTTTGGGCTCTCAAAGCT
TCTAACTCCTGAGCAGTCTAGTCTGTTCACAACAATGAGAGGCACTCGTG
GCTACCTTGCACCTGAATGGCTTACAAACTCTGCAATATCAGAAAAAACT
GATGTTTATAGTTTTGGAATGGTACTGCTTGAACTTGTGAGTGGGAGGAG
AAATTGCTCACCACGATCACAAAGTCATAGCATGGATAGTAATAGTAGTG
GGGTTCCCTCTTCATCGTCGTCAGCCTCAGCACTTGTTTATTTTCCACTA
TTGGCATTGGAAATGCACGAGCAAGGAAAGTACTTGGAGCTGGCTGACCC
AAGATTAGAAGGCAGAGTTACAAATGAGGAGGTGGAAAAATTAGTGTGTA
TTGCTTTGTG
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