BQ623780

Overview
NameBQ623780
Unique NameBQ623780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.998e-28
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV-LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            +G QR++V + +++GSL   LFG+    L W  R  IALG ARGLAYLH G +  IIH DIK  NILL   F+AK++DFGL+K      + + T + GT GY+APE+     ++EK+DVYSFG+VLLEL+S R+
Sbjct:  353 EGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRK 486          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.610e-28
Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 3
Query:    9 RQRLLVYEYMNHGSLDRILFG---NGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTT-MRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCS 410
            ++++LVYEY++ GSL   L+G       L W  R  +A+  A+GL YLH+G E +IIH D+K  NILL     AK+SDFGLSK  T   +S  TT ++GT GYL PE+ +   ++EK+DVYSFG+VLLEL+ GR   S
Sbjct:  673 KRQILVYEYLSGGSLADHLYGPRSKRHSLNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLS 810          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.610e-28
Identity = 66/136 (48.53%), Postives = 93/136 (68.38%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSLDRILFG-NGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKL-LTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSP 413
            + +LVYEYM +G+L   LFG N P L W++R +  +G+ARGL YLH+G E+ IIH D+K  NILL  +F AK+SDFGLSK   + + + + T ++G+ GYL PE+     ++EK+DVYSFG+VL E V  R   +P
Sbjct:  588 EMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINP 723          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: PSKR2_ARATH (Phytosulfokine receptor 2 OS=Arabidopsis thaliana GN=PSKR2 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.610e-28
Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 3
Query:    6 GRQRLLVYEYMNHGSLDRILF----GNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            G  RLL+Y +M +GSLD  L     GN  ++ W  R  IA G ARGLAYLH  CE  +IH D+K  NILL   F+A ++DFGL++LL P  + + T + GT GY+ PE+  +   + + DVYSFG+VLLELV+GRR
Sbjct:  820 GNDRLLIYSFMENGSLDYWLHERVDGNMTLI-WDVRLKIAQGAARGLAYLHKVCEPNVIHRDVKSSNILLDEKFEAHLADFGLARLLRPYDTHVTTDLVGTLGYIPPEYSQSLIATCRGDVYSFGVVLLELVTGRR 954          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.610e-28
Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 3
Query:    6 GRQRLLVYEYMNHGSLDRILFGN----GPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSL-FTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSP 413
            G +RLLVYEYM +GSL+ +L       G  L+W  R  IA+G ARGLA+LH  C   IIH D+K  N+LL   F A++SDFG+++L++   + L  +T+ GT GY+ PE+  +   + K DVYS+G++LLEL+SG++   P
Sbjct:  924 GEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDP 1064          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28
Identity = 70/199 (35.18%), Postives = 114/199 (57.29%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGPV-LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPE--QSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSPRSQSHXXXXXXXXXXXXXXXXXALVYFPLLALEMHEQGKYLELADPRLEGRVTNEEVEK 590
            +  + +LVYEYM +G+L   L+G+G + L W++R +I +G+ARGL YLH+G  + +IH D+K  NILL  +  AK++DFGLSK   PE  Q+ + T ++G+ GYL PE+     ++EK+DVYSFG+V+ E++  R    P                       +V     A++  ++G+   + DP L G++  + + K
Sbjct:  547 ENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSK-TGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDP------------------TLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRK 726          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28
Identity = 64/131 (48.85%), Postives = 90/131 (68.70%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGN--GPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSK--LLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            L+YEYM++G L + L G   G VL W  R  IA+  A GL YLH+GC+  ++H D+K  NILL   F+AKI+DFGLS+   +  +QS + T + GT GYL PE+   S +SEK+DVYSFG++LLE+++ +R
Sbjct:  637 LIYEYMSNGDLHQHLSGKHGGSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQVSTVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQR 767          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28
Identity = 65/134 (48.51%), Postives = 88/134 (65.67%), Query Frame = 3
Query:   12 QRLLVYEYMNHGSLDRILFGNGPV----LEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            QR LVY+YM++G+LD  LF  G      L W +R  I L  A+GLAYLH G +  I H DIK  NILL    +A+++DFGL+K     +S L T + GT GYLAPE+     ++EK+DVYSFG+V+LE++ GR+
Sbjct:  367 QRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRK 500          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28
Identity = 62/140 (44.29%), Postives = 95/140 (67.86%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNG-PVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPE--QSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCSP 413
            +  + +L+YEYM +G++   L+G+G P L W++R +I +G ARGL YLH+G  + +IH D+K  NILL  +F AK++DFGLSK   PE  Q+ + T ++G+ GYL PE+     +++K+DVYSFG+VL E++  R    P
Sbjct:  550 ENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSK-TGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDP 688          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28
Identity = 64/139 (46.04%), Postives = 91/139 (65.47%), Query Frame = 3
Query:    3 QGRQRLLVYEYMNHGSLDRILFGNGP--VLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFT-TMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRRNCS 410
            +G + +LVYE++ + SLD  +F      +L W+ RF I  G ARGL YLH   + KIIH D+K  NILL      K++DFG ++L   +++   T  + GTRGY+APE+L +  IS K+DVYSFG++LLE++SG RN S
Sbjct:  413 EGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNS 551          
The following BLAST results are available for this feature:
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
RKF3_ARATH1.998e-2850.00Probable LRR receptor-like serine/threonine-protei... [more]
Y5487_ARATH2.610e-2848.55Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH2.610e-2848.53Probable receptor-like protein kinase At1g30570 OS... [more]
PSKR2_ARATH2.610e-2849.26Phytosulfokine receptor 2 OS=Arabidopsis thaliana ... [more]
BRL3_ARATH2.610e-2845.39Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5597_ARATH3.409e-2835.18Probable receptor-like protein kinase At5g59700 OS... [more]
MEE39_ARATH3.409e-2848.85Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH4.452e-2848.51Probable receptor-like protein kinase At1g11050 OS... [more]
HERK_ARATH4.452e-2844.29Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK40_ARATH4.452e-2846.04Cysteine-rich receptor-like protein kinase 40 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00871 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00871 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623780 ID=BQ623780; Name=BQ623780; organism=Citrus sinensis; type=EST; length=610bp
CTCAAGGGAGACAACGCCTACTGGTATATGAGTATATGAATCACGGCTCA
CTGGACCGTATCCTCTTTGGAAATGGTCCTGTCTTGGAATGGCAAGAGAG
GTTTGATATAGCACTGGGAACTGCTCGGGGGCTTGCATATTTGCACAGTG
GTTGTGAACAAAAGATCATTCATTGTGATATCAAACCAGAAAACATTCTC
TTGCACTATCATTTTCAGGCAAAGATATCTGATTTTGGGCTCTCAAAGCT
TCTAACTCCTGAGCAGTCTAGTCTGTTCACAACAATGAGAGGCACTCGTG
GCTACCTTGCACCTGAATGGCTTACAAACTCTGCAATATCAGAAAAAACT
GATGTTTATAGTTTTGGAATGGTACTGCTTGAACTTGTGAGTGGGAGGAG
AAATTGCTCACCACGATCACAAAGTCATAGCATGGATAGTAATAGTAGTG
GGGTTCCCTCTTCATCGTCGTCAGCCTCAGCACTTGTTTATTTTCCACTA
TTGGCATTGGAAATGCACGAGCAAGGAAAGTACTTGGAGCTGGCTGACCC
AAGATTAGAAGGCAGAGTTACAAATGAGGAGGTGGAAAAATTAGTGTGTA
TTGCTTTGTG
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