BQ623780

Overview
NameBQ623780
Unique NameBQ623780
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: DLK1_CAEBR (Mitogen-activated protein kinase kinase kinase dlk-1 OS=Caenorhabditis briggsae GN=dlk-1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVS 392
            +V EY   G L  +L     +   Q   D     A G+ YLH   + K+IH D+K  NIL+      KI DFG S L     S++ +   GT  ++APE +     +EK DVYSFG+VL E+++
Sbjct:  125 IVMEYCPKGQLCTVLRQKNLITR-QMFSDWVKEIADGMHYLH---QNKVIHRDLKSPNILISAEDSIKICDFGTSHLQKKNDSTMMSFC-GTVSWMAPEMIKKEPCNEKVDVYSFGVVLWEMLT 243          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: CDC15_YEAST (Cell division control protein 15 OS=Saccharomyces cerevisiae GN=CDC15 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVS 392
            ++ EY  +GSL R++  +   L   E       T  GL YLH    + +IH DIK  NILL      K++DFG+S ++    +S   T+ GT  ++APE L N   S  +D++S G  ++E+++
Sbjct:   97 ILLEYCANGSLRRLISRSSTGLSENESKTYVTQTLLGLKYLHG---EGVIHRDIKAANILLSADNTVKLADFGVSTIV----NSSALTLAGTLNWMAPEILGNRGASTLSDIWSLGATVVEMLT 213          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: BYR1_SCHPO (Protein kinase byr1 OS=Schizosaccharomyces pombe GN=byr1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11
Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVS 392
            L  EYM+ GSLD IL   GP+        I     +GL YL++     IIH D+KP N++++   + K+ DFG+S  L    +S+  T  GT  Y++PE +     + K+D++S G+ ++EL +
Sbjct:  137 LCMEYMDCGSLDAILREGGPI-PLDILGKIINSMVKGLIYLYNVLH--IIHRDLKPSNVVVNSRGEIKLCDFGVSGELV---NSVAQTFVGTSTYMSPERIRGGKYTVKSDIWSLGISIIELAT 254          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 42/128 (32.81%), Postives = 73/128 (57.03%), Query Frame = 3
Query:   21 LVYEYMNHGSL-DRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSGRR 401
            +V EYM+ GSL D +  G G  L+     D+A   A G+A+L +   Q  IH D+   NIL+  ++  K++DFGL++L+  ++ +     +    + APE    +  + K+DV+SFG+++ E+V+  R
Sbjct:  310 IVTEYMSGGSLLDYLSKGEGVNLQLPTLIDMAAQVASGMAFLEA---QGYIHRDLAARNILVGENYICKVADFGLARLIEDDEYTAHEGAKFPIKWTAPEAALYNRFTIKSDVWSFGILMAEIVTKGR 434          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: STE20_KLULA (Serine/threonine-protein kinase STE20 OS=Kluyveromyces lactis GN=STE20 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 42/125 (33.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSG 395
            +V EYM  GSL  ++     +L   +   ++  T +GL +LHS   + +IH DIK +NILL  +   K++DFG    +  E +   TTM GT  ++APE ++      K D++S G++++E++ G
Sbjct:  770 VVMEYMEGGSLTDVV--THCILTEGQIGAVSRETLKGLQFLHS---KGVIHRDIKSDNILLSMNGDIKLTDFGFCAQIN-EVNLKRTTMVGTPYWMAPEVVSRKEYGPKVDIWSLGIMIIEMIEG 888          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: ROCO7_DICDI (Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHY----HFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVS 392
            LV E + +G L + +        W     +A+  A+G+ +LHS C+  I+H D+K  NILL      +  AK+ DFGLS  + P    +         +LAPE + +   +EK D+YS+ +VL E+++
Sbjct: 1848 LVTELLQYGDLAKFIRNTAETFSWGTVLKLAIDVAKGMNFLHS-CKPMIVHRDLKSANILLGGSSMDNLVAKVGDFGLS--IKPIGKEVKGRKVWNWRWLAPECMGDGQYTEKIDIYSYAIVLWEIIT 1972          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: RIPK3_MOUSE (Receptor-interacting serine/threonine-protein kinase 3 OS=Mus musculus GN=Ripk3 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQS-----SLFTTMRGTRGYLAPEWL--TNSAISEKTDVYSFGMVLLELVSGR 398
            LV  +M +GSL  +L    P   W     +      G+ YLHS  +  ++H D+KP NILL     AK++DFGLS      QS     S      GT  YL PE L   N   S+ +DVYSFG+++  +++GR
Sbjct:   93 LVTRFMENGSLAGLLQPECP-RPWPLLCRLLQEVVLGMCYLHS-LDPPLLHRDLKPSNILLDPELHAKLADFGLSTFQGGSQSGSGSGSGSRDSGGTLAYLDPELLFKVNLKASKASDVYSFGILVWAVLAGR 223          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: KCC4_YEAST (Probable serine/threonine-protein kinase KCC4 OS=Saccharomyces cerevisiae GN=KCC4 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 44/127 (34.65%), Postives = 70/127 (55.12%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISE-KTDVYSFGMVLLELVSGR 398
            L+ EY   G L  +L  +GP+ E +E  +       G++Y H+     I+H D+KPEN+LL   +  KI+DFG++ L T   + L  T  G+  Y APE ++        +DV+S G++L  L++GR
Sbjct:  104 LILEYAEKGELFNLLVDHGPLPE-REAINCFRQIIIGISYCHA---LGIVHRDLKPENLLLDSFYNIKIADFGMAALQT--DADLLETSCGSPHYAAPEIVSGLPYEGFASDVWSCGVILFALLTGR 224          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: ITK_MOUSE (Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN=Itk PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 38/124 (30.65%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVS 392
            LV+E+M HG L   L     +   +    + L    G+AYL   C   +IH D+   N L+  +   K+SDFG+++ +  +Q +  T  +    + +PE  + S  S K+DV+SFG+++ E+ S
Sbjct:  438 LVFEFMEHGCLSDYLRSQRGLFAAETLLGMCLDVCEGMAYLEKAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 558          
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Match: IPL1_ASHGO (Spindle assembly checkpoint kinase OS=Ashbya gossypii GN=IPL1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 3
Query:   21 LVYEYMNHGSLDRILFGNGPVLEWQERFDIALGTARGLAYLHSGCEQKIIHCDIKPENILLHYHFQAKISDFGLSKLLTPEQSSLFTTMRGTRGYLAPEWLTNSAISEKTDVYSFGMVLLELVSG 395
            L+ EY+ +G L + L G     +    + +    A  L Y+H   E+ I+H DIKPENI++ ++   K++DFG S ++TP+ S    T+ GT  YL+PE + +   +EK DV++ G++  EL+ G
Sbjct:  184 LLMEYLVNGELYKHLKGRSHFNDVVASYYV-YQMADALDYMH---ERNILHRDIKPENIIIGFNNTIKLTDFGWS-VITPKGSKR-KTLCGTVDYLSPELIRSREYNEKVDVWALGVLTYELLVG 302          
The following BLAST results are available for this feature:
BLAST of BQ623780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
DLK1_CAEBR6.459e-1136.29Mitogen-activated protein kinase kinase kinase dlk... [more]
CDC15_YEAST6.459e-1133.87Cell division control protein 15 OS=Saccharomyces ... [more]
BYR1_SCHPO6.459e-1134.68Protein kinase byr1 OS=Schizosaccharomyces pombe G... [more]
STK_HYDAT8.435e-1132.81Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]
STE20_KLULA8.435e-1133.60Serine/threonine-protein kinase STE20 OS=Kluyverom... [more]
ROCO7_DICDI8.435e-1132.03Probable serine/threonine-protein kinase roco7 OS=... [more]
RIPK3_MOUSE8.435e-1136.84Receptor-interacting serine/threonine-protein kina... [more]
KCC4_YEAST8.435e-1134.65Probable serine/threonine-protein kinase KCC4 OS=S... [more]
ITK_MOUSE8.435e-1130.65Tyrosine-protein kinase ITK/TSK OS=Mus musculus GN... [more]
IPL1_ASHGO8.435e-1135.20Spindle assembly checkpoint kinase OS=Ashbya gossy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00871 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00871 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623780 ID=BQ623780; Name=BQ623780; organism=Citrus sinensis; type=EST; length=610bp
CTCAAGGGAGACAACGCCTACTGGTATATGAGTATATGAATCACGGCTCA
CTGGACCGTATCCTCTTTGGAAATGGTCCTGTCTTGGAATGGCAAGAGAG
GTTTGATATAGCACTGGGAACTGCTCGGGGGCTTGCATATTTGCACAGTG
GTTGTGAACAAAAGATCATTCATTGTGATATCAAACCAGAAAACATTCTC
TTGCACTATCATTTTCAGGCAAAGATATCTGATTTTGGGCTCTCAAAGCT
TCTAACTCCTGAGCAGTCTAGTCTGTTCACAACAATGAGAGGCACTCGTG
GCTACCTTGCACCTGAATGGCTTACAAACTCTGCAATATCAGAAAAAACT
GATGTTTATAGTTTTGGAATGGTACTGCTTGAACTTGTGAGTGGGAGGAG
AAATTGCTCACCACGATCACAAAGTCATAGCATGGATAGTAATAGTAGTG
GGGTTCCCTCTTCATCGTCGTCAGCCTCAGCACTTGTTTATTTTCCACTA
TTGGCATTGGAAATGCACGAGCAAGGAAAGTACTTGGAGCTGGCTGACCC
AAGATTAGAAGGCAGAGTTACAAATGAGGAGGTGGAAAAATTAGTGTGTA
TTGCTTTGTG
back to top