BQ623782

Overview
NameBQ623782
Unique NameBQ623782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.991e-56
Identity = 106/153 (69.28%), Postives = 117/153 (76.47%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            + Y+V QCLGAICG G VK F               +A GY KG GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN +  WDD WIFWVGP IGAA AA YHQ ++RA   K+
Sbjct:  126 VLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANE-LADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKA 277          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.907e-56
Identity = 105/148 (70.95%), Postives = 116/148 (78.38%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRA 445
            L YM  QCLGAICG  +VKGF                A GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A++YN +  W D WIFWVGPFIGAA+AALYHQV++RA
Sbjct:  128 LLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAA-GYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRA 274          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.102e-56
Identity = 102/153 (66.67%), Postives = 118/153 (77.12%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            L YM+ QC GAICGAG+ KGF               V+ GY KG  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIP+TGTGINPARS G A+I+N D  WDD WI+WVGPF+GAA+AA+YHQ ++R    K+
Sbjct:  128 LLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNT-VSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKA 279          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.703e-56
Identity = 103/153 (67.32%), Postives = 120/153 (78.43%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            + Y+V QCLGAICG G+VK F                A GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I+N +  W +HWIFWVGPF+GAA+AA YHQ ++RA   K+
Sbjct:  131 ILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAA-GYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKA 282          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.532e-55
Identity = 105/148 (70.95%), Postives = 116/148 (78.38%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRA 445
            L YM  Q LGAICG  +VKGF               V+ GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN    W D WIFWVGPFIGAA+AALYHQ+V+RA
Sbjct:  130 LLYMAAQSLGAICGVALVKGFQSGFYARYGGGANE-VSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.532e-55
Identity = 105/148 (70.95%), Postives = 118/148 (79.73%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRA 445
            + Y+V Q LGAICG G+VKGF               ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+   W DHWIFWVGP IGAA+AA YHQ V+RA
Sbjct:  131 VLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANE-LSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRA 277          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 3.307e-55
Identity = 104/153 (67.97%), Postives = 117/153 (76.47%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            + Y+V QCLG I G G+VKG M              VA GY+ G  LGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+IYN+   WDDHWIFW GPFIGA  AA YHQ ++RA   K+
Sbjct:  121 VMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANM-VASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKA 272          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.657e-54
Identity = 102/151 (67.55%), Postives = 116/151 (76.82%), Query Frame = 2
Query:    8 YMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            YMV QCLGA CG G+VK F               ++ GY  G G+GAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGF+VF+VHLATIPITGTGINPARS GAA+IYN    WDD WIFWVGPF+GAA+AA YHQ V+RA   K+
Sbjct:  127 YMVAQCLGATCGVGLVKVFQSTYYNRYGGGANM-LSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKA 276          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.218e-51
Identity = 97/147 (65.99%), Postives = 114/147 (77.55%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIR 442
            + Y+V QCLGAI GAG+VKG M              V+ GY+    LGAEI+GTF+LVYTVFSATD KR+ARDS +P+L PLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+   W DHWIFWVGP IGA LAA YH++V+R
Sbjct:  128 VLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANT-VSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLR 273          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.981e-44
Identity = 86/153 (56.21%), Postives = 104/153 (67.97%), Query Frame = 2
Query:    8 YMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII--YNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKS 460
            Y + QC+GA+CGAG+ +                 +A GY+ G G+ AE++GTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +VHLATIPITGTGINPARSLG A++        W   WIFWVGPF GAA A +YH  ++R    K+
Sbjct:  117 YTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKA 269          
The following BLAST results are available for this feature:
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
PIP24_ARATH2.991e-5669.28Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP24_ORYSJ3.907e-5670.95Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP27_MAIZE5.102e-5666.67Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP21_ORYSJ8.703e-5667.32Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP26_MAIZE2.532e-5570.95Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP23_ORYSJ2.532e-5570.95Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP26_ORYSJ3.307e-5567.97Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP26_ARATH3.657e-5467.55Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ2.218e-5165.99Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP28_ORYSJ9.981e-4456.21Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00873 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00873 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623782 ID=BQ623782; Name=BQ623782; organism=Citrus sinensis; type=EST; length=612bp
ACTTTTCTACATGGTCATGCAGTGTCTGGGAGCCATCTGTGGTGCTGGCG
TTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGGCGGCGGT
GCCAATGCTGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCTGA
GATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATG
CCAAACGTAGCGCCAGAGACTCTCATGTTCCTATTTTGGCTCCTTTGCCA
ATTGGGTTCGCTGTGTTCTTGGTTCACTTGGCTACTATCCCTATTACCGG
AACTGGCATCAACCCCGCAAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCACGGTTGGGATGACCATTGGATTTTCTGGGTGGGACCATTCATT
GGAGCAGCACTTGCAGCTTTGTACCACCAGGTTGTGATCAGAGCCATTCC
CTTCAAATCAAGCTGATGGTCTTATGAACGGTCGTGATTGCTGATGCATT
TGTTTATGGCTGTCGTTGGTGGGTCTGTTTTATATTTTCGATTATCCCAA
GTCCATGCATTTTCGGTTCGTTAAATTTTCTGGTTGTTTGGGCTTGTGTA
TGAATTTTCTGT
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