BQ623782

Overview
NameBQ623782
Unique NameBQ623782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.712e-23
Identity = 63/153 (41.18%), Postives = 85/153 (55.56%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALA-ALYHQVVIRAIPFK 457
            +FY+  QCLGAI GAG++  ++              V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA ALY  V    +  K
Sbjct:  119 VFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELK 262          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 2.826e-22
Identity = 62/153 (40.52%), Postives = 85/153 (55.56%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALA-ALYHQVVIRAIPFK 457
            +FY++ QCLGAI GAG++  ++              V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W +HWI+WVGP +GA LA ALY  V    +  K
Sbjct:  116 VFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHWIYWVGPIMGAVLAGALYEYVFCPDVELK 259          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.826e-22
Identity = 62/153 (40.52%), Postives = 84/153 (54.90%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALA-ALYHQVVIRAIPFK 457
            +FY+  QCLGAI GAG++  ++              V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA  LY  V    +  K
Sbjct:  116 VFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 4.081e-21
Identity = 60/153 (39.22%), Postives = 83/153 (54.25%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALA-ALYHQVVIRAIPFK 457
            +FY+  QCLGAI GAG++  ++              V    + G GL  E+I TF LV+T+F++ D+KR+     +     L IG +V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IGA LA  LY  V    +  K
Sbjct:  116 VFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20
Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 439
            + Y++ QCLGA+    ++ G                ++ G + G GLG EI+ TF LV  V + TD +R      VP    L IG +V L HL  I  TG G+NPARS G+A++      +  HWIFWVGP IG A AA+ +  ++
Sbjct:   99 VMYIIAQCLGAVVATAILSGITSGLENNSLGLNG--LSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVP----LAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWVGPMIGGAAAAIIYDFIL 235          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19
Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRA 445
            +FY+++QC+GAI G+ ++K  +              +A G T   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G A+  N D  W +HW++W GP +G  +A + ++ + RA
Sbjct:  104 IFYIIVQCVGAIAGSAILK--VITPAEFRGTLCMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRRK----NLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.988e-19
Identity = 55/143 (38.46%), Postives = 82/143 (57.34%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYH 427
            +FY+V Q +GAI GAG++ G                + +  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FWVGP +GAA+AA+ +
Sbjct:   88 VFYVVAQLVGAIAGAGILYGLAPGNARGNLAVNS--LNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAAVAAILY 221          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18
Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIRAIPFKSS*WSYERS*LLMHLFMAVVGGS 526
            +FY+  Q +GAI GAG++  +               +++  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FWVGP +GA LAA+ +  ++    F SS        L +H  +AVV G+
Sbjct:   88 IFYVAAQLVGAIAGAGIL--YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAVLAAILYFYLL----FPSS--------LSLHDRVAVVKGT 242          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.895e-18
Identity = 54/146 (36.99%), Postives = 78/146 (53.42%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 439
            L Y++ Q LGA+ GAGV+ G                 + G   G G   E++ T   +  VF++ D +   R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I      + +HW+FW GP +GAALAAL +++ +
Sbjct:   87 LGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVG--PGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.233e-18
Identity = 51/147 (34.69%), Postives = 78/147 (53.06%), Query Frame = 2
Query:    2 LFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIR 442
            + Y+ +QC+GAI GA V+K  +               +   T G  +  E + TF+LV  V   +D  R+     +   APL +G ++   HL  I +TG  +NPARS G A++ N    W DHW++WVGP +GA +AAL ++ V +
Sbjct:  100 VLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSF-SSTLTVGQAVLIEALITFILVVVVKGVSDPGRT----DIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAALLYKFVFK 238          
The following BLAST results are available for this feature:
BLAST of BQ623782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
AQP4_NOTAL9.712e-2341.18Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_MOUSE2.826e-2240.52Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME2.826e-2240.52Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP4_BOVIN4.081e-2139.22Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQPA_RANES7.696e-2037.67Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP_CICVR1.714e-1934.46Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_PIG4.988e-1938.46Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP5_MOUSE1.111e-1835.23Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
MIP_CHICK1.895e-1836.99Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_HAEIX3.233e-1834.69Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00873 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00873 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623782 ID=BQ623782; Name=BQ623782; organism=Citrus sinensis; type=EST; length=612bp
ACTTTTCTACATGGTCATGCAGTGTCTGGGAGCCATCTGTGGTGCTGGCG
TTGTAAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCGGCGGCGGT
GCCAATGCTGTAGCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCTGA
GATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATG
CCAAACGTAGCGCCAGAGACTCTCATGTTCCTATTTTGGCTCCTTTGCCA
ATTGGGTTCGCTGTGTTCTTGGTTCACTTGGCTACTATCCCTATTACCGG
AACTGGCATCAACCCCGCAAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCACGGTTGGGATGACCATTGGATTTTCTGGGTGGGACCATTCATT
GGAGCAGCACTTGCAGCTTTGTACCACCAGGTTGTGATCAGAGCCATTCC
CTTCAAATCAAGCTGATGGTCTTATGAACGGTCGTGATTGCTGATGCATT
TGTTTATGGCTGTCGTTGGTGGGTCTGTTTTATATTTTCGATTATCCCAA
GTCCATGCATTTTCGGTTCGTTAAATTTTCTGGTTGTTTGGGCTTGTGTA
TGAATTTTCTGT
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