BQ623790

Overview
NameBQ623790
Unique NameBQ623790
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7005 contig Csv1_Contig7005:526..1172. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.401e-54
Identity = 98/138 (71.01%), Postives = 122/138 (88.41%), Query Frame = 3
Query:    6 IKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            I+G+GWGWAGVIWLY+IVFY+PLD++KF IRY LSG+AW  ++E + AFT +KD+GKE+RE QWA AQRTLHGLQ P+   +FPE++ + ELS++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct:  820 IEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDA-KMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 6.954e-54
Identity = 98/138 (71.01%), Postives = 121/138 (87.68%), Query Frame = 3
Query:    6 IKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            I+G+GWGWAGVIW+Y++VFY+PLD++KF IRY LSG+AW  + E + AFT KKD+GKE+RE QWA AQRTLHGLQ P+T  LF E +++ EL+++AE+AKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQ YTV
Sbjct:  821 IEGIGWGWAGVIWIYNLVFYIPLDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDT-KLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.023e-53
Identity = 99/138 (71.74%), Postives = 119/138 (86.23%), Query Frame = 3
Query:    6 IKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            I+G+GWGWAGVIWLY+IVFY+PLDL  F IRY LSGKAW  ++E + AFT KKD+GKE+RE QWA AQRTLHGLQ P+   +F E +++ EL+++AE+AKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQ YTV
Sbjct:  820 IEGIGWGWAGVIWLYNIVFYIPLDLXXFLIRYALSGKAWDLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDP-KIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.451e-53
Identity = 100/138 (72.46%), Postives = 119/138 (86.23%), Query Frame = 3
Query:    6 IKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            I+G+GWGWAGVIWLY+IV Y+PLDL+KF IRY LSGKAW  +LE + AFT KKD+GKE RE QWA AQRTLHGLQ P+   +F E +++ EL+++AE+AKRRAE+ARLRELHTLKGHVESVVKLKGLDI+TIQQ YTV
Sbjct:  820 IEGIGWGWAGVIWLYNIVTYIPLDLIKFLIRYALSGKAWDLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDP-KIFSETTNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA2_SOLLC (Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.887e-53
Identity = 98/138 (71.01%), Postives = 119/138 (86.23%), Query Frame = 3
Query:    6 IKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            I+G+GWGWAGVIWLY++VFY PLD++KF IRY LSG+AW  +LE + AFT KKD+GKE+RE QWA AQRTLHGLQ P+   LF E +++ EL+++AE+AKRRAE+AR RELHTLKGHVESVVKLKGLDI+TIQQ YTV
Sbjct:  568 IEGIGWGWAGVIWLYNLVFYFPLDIIKFLIRYALSGRAWDLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDI-KLFSEATNFNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.713e-52
Identity = 95/138 (68.84%), Postives = 120/138 (86.96%), Query Frame = 3
Query:    6 IKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            I+G+GWGWAGVIWLY+I+FY+PLD +KF IRY LSG+AW  ++E + AFT +KD+GKE+RE QWA AQRTLHGLQ P+T  +F +++   EL+++AE+AKRRAE+ARLRELHTLKGHVESVV+LKGLDI+TIQQ YTV
Sbjct:  824 IEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDT-KMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA7_ARATH (ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=AHA7 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.457e-35
Identity = 73/139 (52.52%), Postives = 101/139 (72.66%), Query Frame = 3
Query:    6 IKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDI-DTIQQHYTV 419
            I+ +GWGW GVIW+++IV Y+ LD +KF +RY LSGK+W  ++E +TA T KK++G+EER A WA  +RT HGL+  +      E++S  EL+ +AE+AKRRAE+AR+REL TLKG VES  KLKG D+ D    +YT+
Sbjct:  825 IRSIGWGWTGVIWIFNIVTYMLLDPIKFLVRYALSGKSWDRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQ--KPVYERNSATELNNMAEEAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMA10_ARATH (ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31
Identity = 66/139 (47.48%), Postives = 93/139 (66.91%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETNNLFPEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 419
            +I G+GW WAGVIWLYS++FY+PLD++KF   Y LSG+AW  +L+ KTAFT KKDYGK++      ++QR         + +    + S    S IAEQ +RRAE+ARL E+H++  H+ESV+KLK +D   I+  +TV
Sbjct:  818 KITGIGWRWAGVIWLYSLIFYIPLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQR---------SRSAEELRGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947          
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Match: PMAX_ARATH (Putative ATPase, plasma membrane-like OS=Arabidopsis thaliana GN=At4g11730 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 3
Query:    3 RIKGVGWGWAGVIWLYSIVFYVPLDLMKFAIRYILSGKA 119
            RI+G+GW WAGVIWLY+I+F+ PLD+MKF IRYIL+GKA
Sbjct:  724 RIEGIGWSWAGVIWLYNIIFFFPLDIMKFGIRYILTGKA 762          
The following BLAST results are available for this feature:
BLAST of BQ623790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PMA11_ARATH1.401e-5471.01ATPase 11, plasma membrane-type OS=Arabidopsis tha... [more]
PMA1_NICPL6.954e-5471.01Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo... [more]
PMA3_NICPL2.023e-5371.74Plasma membrane ATPase 3 OS=Nicotiana plumbaginifo... [more]
PMA1_SOLLC3.451e-5372.46Plasma membrane ATPase 1 OS=Solanum lycopersicum G... [more]
PMA2_SOLLC5.887e-5371.01Plasma membrane ATPase 2 (Fragment) OS=Solanum lyc... [more]
PMA4_ARATH1.713e-5268.84ATPase 4, plasma membrane-type OS=Arabidopsis thal... [more]
PMA7_ARATH1.457e-3552.52ATPase 7, plasma membrane-type OS=Arabidopsis thal... [more]
PMA10_ARATH6.334e-3147.48ATPase 10, plasma membrane-type OS=Arabidopsis tha... [more]
PMAX_ARATH1.327e-1274.36Putative ATPase, plasma membrane-like OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00881 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00881 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623790 ID=BQ623790; Name=BQ623790; organism=Citrus sinensis; type=EST; length=648bp
CAAGAATAAAGGGTGTTGGCTGGGGATGGGCCGGTGTCATTTGGCTTTAC
AGTATTGTCTTCTATGTCCCACTTGACCTAATGAAGTTTGCCATCCGTTA
CATCTTAAGTGGAAAGGCTTGGCTCAACTTGCTCGAAAACAAGACTGCAT
TCACCACCAAGAAAGACTATGGTAAAGAAGAGAGAGAAGCTCAATGGGCT
CTCGCGCAAAGAACCCTTCATGGGCTTCAACCACCAGAAACGAATAATCT
CTTCCCTGAAAAGAGTAGCTACAGAGAATTGTCTGAGATTGCTGAGCAAG
CCAAGAGACGAGCCGAAGTTGCAAGGCTTCGGGAGCTTCACACACTCAAA
GGACATGTCGAGTCAGTGGTGAAGCTGAAGGGCTTGGACATTGATACGAT
CCAGCAGCATTATACAGTGTAAAAAGCCAGAAGGAAAAAACATTACTCGC
GGAAAAAGGGCCAGTTCAATGACGGCCTTATTCGAGAGAAGGTGTCTCAA
TGATAAAAGGGCTTCTAGATAGAGATGAGAGCTTGTTTTCGCTATAAGTC
TCCTAGTGTTTACTTTTTTTTTTTTTTTTTATCAAAATGTTTTCCAATGC
CGGAAGAATGGATTGTGTATTTCAGCGCCGGAAAGAAAGGACTGGATT
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