BQ623806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_SYNEL (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus elongatus GN=petC PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 4.694e-38 Identity = 67/94 (71.28%), Postives = 81/94 (86.17%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWW 280 GDPTY++V +D +A+YG+NAVCTHLGCVVPWN +ENKFICPCHGSQY++ G+VVRGPAPLSLAL A + E+ K+VF PWTE DFRTG+ PWW Sbjct: 86 GDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCHGSQYDSTGKVVRGPAPLSLALVKATVTEDDKLVFTPWTEIDFRTGKEPWW 179
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_PROMT (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL2A) GN=petC PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 6.130e-38 Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 280 GDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +IE+ +V+ WTETDFRTG PWW Sbjct: 85 GDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_PROM1 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain NATL1A) GN=petC PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 6.130e-38 Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 280 GDPTYL+VE + + SYGINA+CTHLGCVVPWNS NK++CPCHGSQY++ G+VVRGPAPLSLA+AH +IE+ +V+ WTETDFRTG PWW Sbjct: 85 GDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGANKYMCPCHGSQYDSTGKVVRGPAPLSLAIAHVSIEDDQVLVSQWTETDFRTGTDPWW 177
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_PROM4 (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus (strain MIT 9211) GN=petC PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.046e-37 Identity = 65/93 (69.89%), Postives = 77/93 (82.80%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWW 280 GDPTYL+VE + + ++GINA+CTHLGCVVPWNS NK+ICPCHGSQY+ G+VVRGPAPLSLALAH ++E+ KV W ETDFRTGE PWW Sbjct: 85 GDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALAHIDVEDDKVFVSQWAETDFRTGEKPWW 177
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRIA_VOLCA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Volvox carteri GN=petC PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.366e-37 Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANI-ENGKVVFVPWTETDFRTGEAPWWA 283 GDPTYL+V D T+ YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPLSLALAH ++ E+G V F W+ETDFRTG PWWA Sbjct: 112 GDPTYLIVTADGTIEKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPLSLALAHCDVQEDGLVTFSTWSETDFRTGLEPWWA 206
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9311) GN=petC PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.784e-37 Identity = 66/94 (70.21%), Postives = 77/94 (81.91%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 283 GDPTYL+VE + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ +++N V WTETDFRTGE PWW+ Sbjct: 85 GDPTYLIVEGVDAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVDNDNVFVSQWTETDFRTGEKPWWS 178
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_SYNR3 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain RCC307) GN=petC PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.784e-37 Identity = 65/94 (69.15%), Postives = 76/94 (80.85%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 283 GDPTYL+V+ ++ YGINA+CTHLGCVVPWN+ NKF+CPCHGSQY+ G+VVRGPAPLSLALAH N+EN V W+ETDFRT E PWWA Sbjct: 85 GDPTYLIVDGPDSIGDYGINAICTHLGCVVPWNAGANKFMCPCHGSQYDATGKVVRGPAPLSLALAHVNVENDNVFVSQWSETDFRTDEKPWWA 178
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_PROMA (Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus marinus GN=petC PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.784e-37 Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 283 GDPTYL+V+ D + ++GINA+CTHLGCVVPWNS NK+ICPCHGSQY+ G+VVRGPAPLSLAL H +I++ V+ WTETDFRTG+ PWWA Sbjct: 85 GDPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSGANKYICPCHGSQYDANGKVVRGPAPLSLALTHIDIDDDNVLVSQWTETDFRTGDKPWWA 178
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRI_SYNS9 (Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp. (strain CC9902) GN=petC PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.777e-37 Identity = 65/94 (69.15%), Postives = 77/94 (81.91%), Query Frame = 2 Query: 2 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 283 GDPTYL+VE + SYGINA+CTHLGCVVPWNS NKF+CPCHGSQY+ G+VVRGPAPLSLALA+ ++E+ V W+ETDFRTG+ PWWA Sbjct: 85 GDPTYLIVEGADAIGSYGINAICTHLGCVVPWNSGANKFMCPCHGSQYDATGKVVRGPAPLSLALANVSVEDDNVFVSEWSETDFRTGDKPWWA 178
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Match: UCRIA_BIGNA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Bigelowiella natans GN=petC PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.777e-37 Identity = 67/95 (70.53%), Postives = 75/95 (78.95%), Query Frame = 2 Query: 2 GDPTYLVVEKD-KTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHANIENGKVVFVPWTETDFRTGEAPWWA 283 GDPTYL+V D TL SYG+NA+CTHLGCVVPW++A NKF CPCHGSQY G VVRGPAP L LAH +NGK++ PWTETDFRTGE PWWA Sbjct: 158 GDPTYLIVNDDGSTLNSYGLNAICTHLGCVVPWDAASNKFKCPCHGSQYAPDGHVVRGPAPRPLQLAHVEDDNGKILLSPWTETDFRTGEKPWWA 252 The following BLAST results are available for this feature:
BLAST of BQ623806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623806 ID=BQ623806; Name=BQ623806; organism=Citrus sinensis; type=EST; length=605bpback to top |