BQ623811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.912e-42 Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 193 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265 HSP 2 Score: 46.9802 bits (110), Expect = 5.912e-42 Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QVVLMG +EGYR+ GGPLGE D +YP Sbjct: 162 ASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.703e-42 Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 AFDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAWAYATNFVPGK Sbjct: 194 AFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266 HSP 2 Score: 48.521 bits (114), Expect = 7.703e-42 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 ACQVVLMG +EGYR+ GG LGE DPL P Sbjct: 163 ACQVVLMGLIEGYRVGGGTLGEGLDPLLP 191
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.308e-41 Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK Sbjct: 193 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265 HSP 2 Score: 47.3654 bits (111), Expect = 1.308e-41 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QVVLMG VEGYR+ GGPLGE D +YP Sbjct: 162 AAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.401e-41 Identity = 63/73 (86.30%), Postives = 71/73 (97.26%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 AFDPLGLADDP++FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV NNAWA+ATNFVPG+ Sbjct: 193 AFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265 HSP 2 Score: 50.8322 bits (120), Expect = 6.401e-41 Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QVVLMG VEGYR+ GGPLGE DPLYP Sbjct: 162 ATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 8.341e-41 Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 AFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 191 AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263 HSP 2 Score: 46.595 bits (109), Expect = 8.341e-41 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QVVLMG VEGYR+ GGPLGE D +YP Sbjct: 160 AVQVVLMGFVEGYRVGGGPLGEGLDKVYP 188
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 8.341e-41 Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 AFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWAYATNFVPGK Sbjct: 191 AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263 HSP 2 Score: 46.595 bits (109), Expect = 8.341e-41 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QVVLMG VEGYR+ GGPLGE D +YP Sbjct: 160 AVQVVLMGFVEGYRVGGGPLGEGLDKVYP 188
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.448e-40 Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 314 +FDPL DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 52 SFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124 HSP 2 Score: 46.9802 bits (110), Expect = 1.448e-40 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAG-GPLGEVTDPLYP 88 A QV+LMGAVEGYR+AG GPLGE D LYP Sbjct: 20 ATQVILMGAVEGYRVAGDGPLGEAEDLLYP 49
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.277e-36 Identity = 58/71 (81.69%), Postives = 63/71 (88.73%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 308 AFDPLGLADDP+ FAELKVKEIKNGRLAMF+ GFFVQAIVTGKGP+ENL DHLA+P NNA+AYAT F P Sbjct: 202 AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272 HSP 2 Score: 48.521 bits (114), Expect = 4.277e-36 Identity = 22/29 (75.86%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QVVLMG VEGYR+ GGP GE DPLYP Sbjct: 171 AVQVVLMGLVEGYRVNGGPAGEGLDPLYP 199
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.577e-36 Identity = 59/71 (83.10%), Postives = 64/71 (90.14%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 308 +FDPLGLADDP+ FAELKVKEIKNGRLAMFS FGFFVQAIVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 184 SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254 HSP 2 Score: 48.1358 bits (113), Expect = 5.577e-36 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QVVLMG +EGYR+ GGP GE DPLYP Sbjct: 153 AVQVVLMGLIEGYRVNGGPAGEGLDPLYP 181
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.623e-35 Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 3 Query: 96 AFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 308 +FDPLGLADDP+ FAELKVKEIKNGRLA FSMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P Sbjct: 181 SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251 HSP 2 Score: 47.7506 bits (112), Expect = 4.623e-35 Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 ACQVVLMGAVEGYRIAGGPLGEVTDPLYP 88 A QV+LMG +EGYR+ GGP GE DPLYP Sbjct: 150 AVQVILMGLIEGYRVNGGPAGEGLDPLYP 178 The following BLAST results are available for this feature:
BLAST of BQ623811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623811 ID=BQ623811; Name=BQ623811; organism=Citrus sinensis; type=EST; length=425bpback to top |