BQ623839

Overview
NameBQ623839
Unique NameBQ623839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6053 contig Csv1_Contig6053:371..982. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 191.045 bits (484), Expect = 3.916e-48
Identity = 93/189 (49.21%), Postives = 122/189 (64.55%), Query Frame = 2
Query:    8 VKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQ 574
            V+ +    + I AQN +    GAFTGE    Q+ D+G  W + GHSERR +I E D+FI +K  +AL  G+ VI CIGE L+ER+ G T DVC +QL A +  +  W N+V+AYEPVWAIGTG  ATPE A+E H  +R  L  ++ A+ A KTRI+YGGSVNG N  +  +K  +  F VGGASLK +
Sbjct:   51 VEQNKQPTVAIGAQNVFDKSCGAFTGETCASQILDVGASWTLTGHSERRTIIKESDEFIAEKTKFALDTGVKVILCIGETLEERKGGVTLDVCARQLDAVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIRAHLAKSIGAEQAEKTRILYGGSVNGKNAKDFKDKANVDGFLVGGASLKPE 239          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPIS_TRYCR (Triosephosphate isomerase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.139e-47
Identity = 97/184 (52.72%), Postives = 125/184 (67.93%), Query Frame = 2
Query:   29 RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQ 574
            + +IAAQN+ + + GAFTGE+S++ LKD G  WVVLGHSERR   GE ++ + +K A A + G  VI C+GE  +EREAG+T  V   QL A A  +   +W  VVIAYEPVWAIGTGKVATP+QAQEVH  LR W+++ +  D+A + RI+YGGSV   N   L   R +  F VGGASLK +
Sbjct:   60 KFQIAAQNA-ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPE 242          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 3.315e-47
Identity = 89/181 (49.17%), Postives = 123/181 (67.96%), Query Frame = 2
Query:   32 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQ 574
            ++I+AQN++    GA+TGE SVEQ+KD+G +WV+LGHSERR    E D+ + +K  +AL  G+ VI CIGE L+E++   T  V  +QL+A  + +  W NVV+AYEPVWAIGTG  AT E AQ++H ++R++L   +S DVA   RI+YGGS NG N     +K  +  F VGGASLK +
Sbjct:   59 VKISAQNAYSKASGAYTGENSVEQIKDVGAEWVILGHSERRTYFNETDEIVAEKTKFALDSGVKVILCIGETLEEKQQNITLQVVQRQLQAVLEKVQDWTNVVVAYEPVWAIGTGLAATAEDAQDIHHSIREFLAEKLSRDVADSVRILYGGSANGKNAVTFKDKADVDGFLVGGASLKPE 239          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPIS_COPC7 (Triosephosphate isomerase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TPI PE=3 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 7.385e-47
Identity = 96/183 (52.46%), Postives = 126/183 (68.85%), Query Frame = 2
Query:   32 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQ 574
            +++AAQN++  + GAFTGEIS +Q+ D G  +V+LGHSERR +  E  + +  K   AL  GL VI CIGE L+ERE G+T  VC +QL A    +    W N+VIAYEPVWAIGTGKVAT  QAQE H  +R +L   VS  VA++TR+IYGGSVN +N  +LA+++ +  F VGGASLK +
Sbjct:   59 VKVAAQNAYFKESGAFTGEISPKQISDAGIPYVILGHSERRTLFHETSEVVALKTRAALDNGLKVILCIGETLKEREEGRTAAVCEEQLSAVVKQLKEEDWSNIVIAYEPVWAIGTGKVATTSQAQETHVDVRKYLATAVSPKVASETRVIYGGSVNAANSKDLASQQDIDGFLVGGASLKPE 241          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPI1_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.385e-47
Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 2
Query:   29 RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQ 574
            ++ IAAQN ++   GA+TGE SVE L+D+G K V++GHSERR ++GE D+   KKA  AL +G+ VI C+GE L ER+A +T +V   QL+A    +      W  VVIAYEPVW+IGTG VATPEQA+EVH  LR W    V A+ A   RIIYGGS NGSNC +L     +  F VGGASLK +
Sbjct:   59 QLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPE 244          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPIS_DICDI (Triosephosphate isomerase OS=Dictyostelium discoideum GN=tpiA PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.252e-46
Identity = 91/186 (48.92%), Postives = 121/186 (65.05%), Query Frame = 2
Query:   29 RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS-WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQSLL 583
            + ++ +QN +    GAFTGEIS   L D+G  +V++GHSERR+V  E  + I KK  YA+S GL VI C+GE L +R++  T  +  +QLK +A   P  W  +VIAYEPVWAIGTG VATP++AQ+ H  +R W+   VS DVA KT I+YGGSVN  NC  L+ +  +  F VGGASL A   +
Sbjct:   61 KFKVCSQNCYSVAKGAFTGEISANMLVDLGIPYVIIGHSERRNVFSESSELITKKTKYAISLGLTVILCLGELLADRKSNNTEHILSEQLKDFASFTPEEWSKIVIAYEPVWAIGTGAVATPQEAQDTHVFIRKWISEKVSEDVAKKTSIMYGGSVNADNCHNLSKQSDIDGFLVGGASLVASDFI 246          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPI2_GIALA (Triosephosphate isomerase OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.252e-46
Identity = 98/185 (52.97%), Postives = 122/185 (65.95%), Query Frame = 2
Query:   32 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQ 574
            ++IAAQN ++   GA+TGE SVE L D+G   V++GHSERR ++GE ++   KKA  AL +G+ VI C GE L ER+A  T +V   QL+A    I      W+NVVIAYEPVW+IGTG VATPEQA+EVH  LR W    V A+ A   RIIYGGS NGSNC +L     +  F VGGASLK +
Sbjct:   60 LKIAAQNVYLEGNGAWTGETSVEMLLDMGLSHVIIGHSERRRIMGETNEQSAKKAKRALDKGMTVIFCTGETLDERKANNTMEVNIAQLEALKKEIGESKKLWENVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFAEKVCAEGAQHIRIIYGGSANGSNCEKLGQCPNIDGFLVGGASLKPE 244          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPIS_ENTHI (Triosephosphate isomerase OS=Entamoeba histolytica GN=TPI PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 8.165e-46
Identity = 97/191 (50.79%), Postives = 126/191 (65.97%), Query Frame = 2
Query:   32 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQSLLPFGNS 598
            I ++A+N+W  K GA+TGE+ V  L D    +V+LGHSERR +  E ++ + +K   A+  GL VIACIGE   +R A +T +V   QLKA  +AI   +W N+++AYEPVWAIGTGK ATP+QAQEVH  +R W+  N+S +VA  TRI YGGSVN +NC ELA K  +  F VGGASL A       NS
Sbjct:   67 ILVSAENAWT-KSGAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVGGASLDAAKFKTIINS 256          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPISL_HUMAN (Putative triosephosphate isomerase-like protein LOC286016 OS=Homo sapiens PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.224e-43
Identity = 93/188 (49.47%), Postives = 116/188 (61.70%), Query Frame = 2
Query:   11 KNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQ 574
            +  L  +I +A QN +    GAFTGEIS   +KD+G  WVV                   K A+AL+E LGVIACIGE+L EREAG T  V F+Q K  AD +  W  V++AY+PVWA GTGK ATP+QAQEVH  LR WLK+N+S  VA  T IIYGGSV  + C ELA++  +  F + G SLK +
Sbjct:   53 RQKLAPKIAVAPQNCYKVTNGAFTGEISPGMVKDLGVTWVV-------------------KVAHALAERLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGKTATPQQAQEVHKKLRGWLKSNISDAVAQSTGIIYGGSVTKATCKELASQPDVAAFLMSGVSLKPE 221          
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Match: TPIS_ALKOO (Triosephosphate isomerase OS=Alkaliphilus oremlandii (strain OhILAs) GN=tpiA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.793e-43
Identity = 93/196 (47.45%), Postives = 126/196 (64.29%), Query Frame = 2
Query:    5 QVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNNVSADVATKTRIIYGGSVNGSNCAELANKRILMVFWVGGASLKAQSLL 583
            QV+ +L    +++ AQN    + GA+TGEIS   LKDIG ++V+LGHSERR    E D+ + KK   A+ E L  I CIGE L+EREA +TFDV  +QL    + +P  + DNVV+AYEP+WAIGTGK A+ E+AQ V A +R  ++     D++ + RI YGGSV  SN  E+ N+  +    VGGASLKA+  L
Sbjct:   48 QVQKALVGTNLKLGAQNMHWEEDGAYTGEISANMLKDIGVEYVILGHSERRQYFNETDETVNKKVKKAIKENLKPIVCIGESLEEREANQTFDVIKKQLLGAFEGVPAEAMDNVVLAYEPIWAIGTGKTASSEEAQTVIAYIRSLIEEKYGVDISEEVRIQYGGSVKASNATEIMNETDIDGALVGGASLKAEEFL 243          
The following BLAST results are available for this feature:
BLAST of BQ623839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_CANAL3.916e-4849.21Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_TRYCR1.139e-4752.72Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_KLULA3.315e-4749.17Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_COPC77.385e-4752.46Triosephosphate isomerase OS=Coprinopsis cinerea (... [more]
TPI1_GIALA7.385e-4752.69Triosephosphate isomerase OS=Giardia lamblia PE=1 ... [more]
TPIS_DICDI6.252e-4648.92Triosephosphate isomerase OS=Dictyostelium discoid... [more]
TPI2_GIALA6.252e-4652.97Triosephosphate isomerase OS=Giardia lamblia PE=3 ... [more]
TPIS_ENTHI8.165e-4650.79Triosephosphate isomerase OS=Entamoeba histolytica... [more]
TPISL_HUMAN2.224e-4349.47Putative triosephosphate isomerase-like protein LO... [more]
TPIS_ALKOO3.793e-4347.45Triosephosphate isomerase OS=Alkaliphilus oremland... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00919 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00919 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623839 ID=BQ623839; Name=BQ623839; organism=Citrus sinensis; type=EST; length=612bp
TGATCAAGTGAAGAATTCATTAACAGATAGAATTGAGATAGCAGCTCAGA
ACTCTTGGGTCGGAAAAGGTGGAGCATTTACAGGAGAAATCAGTGTGGAA
CAACTGAAAGATATTGGCTGCAAGTGGGTTGTTCTGGGGCATTCTGAGCG
CAGACATGTTATTGGTGAAGATGATCAGTTTATAGGGAAGAAAGCTGCCT
ATGCCTTGAGCGAGGGACTTGGTGTAATAGCTTGTATCGGGGAACAGTTG
CAAGAGAGAGAAGCAGGAAAAACTTTTGATGTCTGTTTTCAGCAACTTAA
AGCCTATGCAGATGCTATACCCAGTTGGGATAATGTAGTCATTGCATATG
AGCCTGTATGGGCTATTGGAACTGGTAAAGTGGCCACCCCCGAGCAGGCT
CAGGAAGTACATGCTGCTCTTCGTGATTGGCTTAAAAACAATGTCTCAGC
AGACGTTGCCACTAAAACACGTATTATCTATGGAGGGTCAGTAAATGGAA
GCAATTGTGCTGAACTTGCAAACAAGAGGATATTGATGGTTTTCTGGGTT
GGTGGCGCTTCCTTGAAGGCCCAGAGTTTGCTACCATTTGGCAATTCCCG
TAACATCCAAGA
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