BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.037e-15
Identity = 59/195 (30.26%), Postives = 95/195 (48.72%), Query Frame = 3
Query:    9 KNLVALL----SAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTF-REAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVP---YSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLVS 569
            KN+ A++    SA  +  S T+   M  +   P + +K ++E  ++   +   +   +  +K   Y  +VI E+LRL PP      RE  E    +G+ IP   +V  +  A  R+P Y+  PE F+P RF  +        + Y+PFGGG+ ICPG  +A   I L +   +  F W+  N ++ N K SR V+
Sbjct:  285 KNIKAIIFNIFSAGTETSSTTVDWAMCEMIKNPTVMKKAQEEVRKVFNEEGNVDETKLHQLK---YLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQS-NTEKLNMKESRGVT 475          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP6T3_DROME (Probable cytochrome P450 6t3 OS=Drosophila melanogaster GN=Cyp6t3 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15
Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = 3
Query:   24 LLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFRE----AIEDFNYE---GFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKF 512
            +L A F+  SA +   +  LA  P+I E++R E  E   S A    +S   +  + Y   V  E+LRL P A+   RE    A E F+ +    F +P G   + SI   +R+  ++P P  FDP RF  ER+  I P +Y+PFG G H C G     LQ+ L + H ++++
Sbjct:  297 ILLAGFETSSALMGFTLYELAKAPDIQERLRSELREAFISTAT---LSYDTLMTLPYLKMVCLEALRLYPAAAFVNRECTSSASEGFSLQPHVDFIVPPGMPAYISILGLHRDERFWPEPCVFDPERFGPERSRHIHPMTYIPFGAGPHGCIGSRLGVLQLKLGIVHILKQY 465          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP6L1_BLAGE (Cytochrome P450 6l1 OS=Blattella germanica GN=CYP6L1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3
Query:   30 SAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEG--FRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPG 455
            +A F+  S+ +   M  LA  PEI +++R E  E+  +   G  ++ + +KKM+Y   V+SE LR  PP S   R  + D++  G    I KG  +  S+   +R+  ++P PE F+P RF  E+   + P+SY+PFG G   C G
Sbjct:  297 AAGFETTSSAMAFAMYELALHPEIQDRLRTEIQEV--TACHGGQVTYEGVKKMSYLDMVVSEVLRKYPPMSFIDRVCLHDYHIPGTDVVIEKGTPIFVSLLGLHRDSIFYPDPEDFNPERFNKEKKSGVHPFSYIPFGDGPRNCIG 440          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AH_CAVPO (Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15
Identity = 52/170 (30.59%), Postives = 89/170 (52.35%), Query Frame = 3
Query:   18 VALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKA-PGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER--NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKW 518
            +  + A ++  S+T+  IM +LA  P++ +K+++E  +   +KA P   + M+    M Y   V++E+LRL P  +   R + +DF   G   PKG  V     A +R+ +Y+P P+ F P RF +   + I PY Y+PFG G   C G   A + + L +   ++ F +
Sbjct:  300 IFFIVAGYETTSSTLCFIMYSLATHPDVQKKLQQEIDKTLPNKAFPTYDVMME----MEYLDMVVNETLRLYPVTNRIERMSKKDFEINGMSFPKGTGVMIPSFALHRDSKYWPEPDEFRPERFSKKNKENIDPYIYMPFGNGPRNCIGMRMALMNLKLALIRLLQNFSF 465          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15
Identity = 53/173 (30.64%), Postives = 84/173 (48.55%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTF-REAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVP---YSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L+ +L A  D  + T+T  M  LA  P + +KV+ E     K+K   E +S  D  K+ Y   VI E+ RL P       REA+ +F   G+ IP   ++H ++ A  R+P+ +  PE F P RF  N+       +  +PFGGG+ +CP        +   + + +  F W+
Sbjct:  295 LMDVLLAGMDTSAITMTWAMAELAKNPRVMKKVQSEIRSQIKNK---ERISFDDTDKLEYLKMVIKETWRLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWK 464          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3A9_RAT (Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15
Identity = 51/170 (30.00%), Postives = 85/170 (50.00%), Query Frame = 3
Query:   18 VALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER--NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            V  + A ++  S+ ++ ++  LA  P+I +K++ E      +KA     +   + +M Y   V++E+LRL P A    R    D    G  IPKG  V     A +++P Y+P PE F P RF +   D I PY Y+PFG G   C G  +A + + + +   ++ F ++
Sbjct:  300 VIFIFAGYETTSSALSFVLYLLAIHPDIQKKLQDEIDAALPNKAHA---TYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGVFIPKGTVVMIPTFALHKDPHYWPEPEEFRPERFSKKNQDNINPYMYLPFGNGPRNCIGMRFALMNMKVALFRVLQNFSFQ 466          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP27A_HUMAN (Sterol 26-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27A1 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15
Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 3
Query:   12 NLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIV------PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFK 515
            +L  LL A  D  S T+T  + +L+  PEI E + +E + +  +   G+    KD   M    +V+ E+LRL P      R   ++   +GF  PK  +  +  +  +R+P  F  PE+F P R+ RN          P+  VPFG G   C G+  A+L++ L +   ++K+K
Sbjct:  328 SLPELLMAGVDTTSNTLTWALYHLSKDPEIQEALHEEVVGVVPA---GQVPQHKDFAHMPLLKAVLKETLRLYPVVPTNSRIIEKEIEVDGFLFPKNTQFVFCHYVVSRDPTAFSEPESFQPHRWLRNSQPATPRIQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQKYK 498          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP6B5_PAPGL (Cytochrome P450 6B5 (Fragment) OS=Papilio glaucus GN=CYP6B5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.311e-15
Identity = 57/179 (31.84%), Postives = 91/179 (50.84%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIP--KGWKVHWSIHATNRNPEYFPSPETFDPSRFE----RNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            +A       +A ++  ++T++ ++  LA+ P+I EKV  E  E  K +  GE ++   + +MTY   V  E+LR  P A    R A  D+   G  +   KG  V  S    + +P+Y+P PE FDP RF     RN    P +Y+PFG GQ  C G  + + Q+ + +   + KF++E
Sbjct:  293 IAAQTFIFYAAGYETSASTMSFLLFELAENPDIQEKVIAEVDETLK-RHNGE-ITYDTLSEMTYLTQVFHETLRKYPVADILLRNAKADYAVPGTNVTLKKGQTVVVSGFGIHYDPKYYPDPEKFDPERFSPENVRNRH--PCAYIPFGAGQRKCLGMRFGQWQVQVCIIKLLSKFRFE 467          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP6B4_PAPGL (Cytochrome P450 6B4 OS=Papilio glaucus GN=CYP6B4 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.311e-15
Identity = 57/179 (31.84%), Postives = 91/179 (50.84%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIP--KGWKVHWSIHATNRNPEYFPSPETFDPSRFE----RNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            +A       +A ++  ++T++ ++  LA+ P+I EKV  E  E  K +  GE ++   + +MTY   V  E+LR  P A    R A  D+   G  +   KG  V  S    + +P+Y+P PE FDP RF     RN    P +Y+PFG GQ  C G  + + Q+ + +   + KF++E
Sbjct:  293 IAAQTFIFYAAGYETSASTMSFLLFELAENPDIQEKVIAEVDETLK-RHNGE-ITYDTLSEMTYLTQVFHETLRKYPVADILLRNAKADYAVPGTNVTLKKGQTVVVSGFGIHYDPKYYPDPEKFDPERFSPENVRNRH--PCAYIPFGAGQRKCLGMRFGQWQVQVCIIKLLSKFRFE 467          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.311e-15
Identity = 47/143 (32.87%), Postives = 75/143 (52.45%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYA 467
            D  ++ I+ I+  LA  PE  ++ R+E   I      G  ++   + +M Y+   I E+LRL PP  G  RE  +   + +G  +P G  +  SI+  + NP+ +P+PE FDPSRF        ++++PF GG   C GK +A
Sbjct:  318 DTTASGISWILYALASHPEHQQRCREE---IQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRFAPGSARHSHAFMPFSGGSRNCIGKQFA 457          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
C71DC_CATRO1.037e-1530.26Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
CP6T3_DROME1.355e-1533.72Probable cytochrome P450 6t3 OS=Drosophila melanog... [more]
CP6L1_BLAGE1.355e-1534.25Cytochrome P450 6l1 OS=Blattella germanica GN=CYP6... [more]
CP3AH_CAVPO1.355e-1530.59Cytochrome P450 3A17 OS=Cavia porcellus GN=CYP3A17... [more]
C71BV_ARATH1.355e-1530.64Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
CP3A9_RAT1.770e-1530.00Cytochrome P450 3A9 OS=Rattus norvegicus GN=Cyp3a9... [more]
CP27A_HUMAN1.770e-1529.89Sterol 26-hydroxylase, mitochondrial OS=Homo sapie... [more]
CP6B5_PAPGL2.311e-1531.84Cytochrome P450 6B5 (Fragment) OS=Papilio glaucus ... [more]
CP6B4_PAPGL2.311e-1531.84Cytochrome P450 6B4 OS=Papilio glaucus GN=CYP6B4 P... [more]
CP4AO_PIG2.311e-1532.87Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
back to top