BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.942e-15
Identity = 48/180 (26.67%), Postives = 86/180 (47.78%), Query Frame = 3
Query:   30 SAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER-------NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPND 548
            SA  +  S T   ++  L   P +  K + E     K K   +   + D++++ Y  SV+ E++R+ PP     R   E+    G+ IP   ++  ++ +  RNP Y+  P+TF P RF++       ND    + +VPFG G+ ICPG ++    + + +   +  F W+     +P+D
Sbjct:  298 SAGTETSSTTTLWVLAELMRNPAVMAKAQAEVRAALKEKTNWD---VDDVQELKYMKSVVKETMRMHPPIPLIPRSCREECVVNGYTIPNKARIMINVWSMGRNPLYWEKPDTFWPERFDQVSKDFMGND----FEFVPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSD 470          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C11B2_MESAU (Cytochrome P450 11B2, mitochondrial OS=Mesocricetus auratus GN=CYP11B2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.942e-15
Identity = 56/194 (28.87%), Postives = 92/194 (47.42%), Query Frame = 3
Query:   12 NLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF-ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRS--RLVSCPGDS 584
            N + L + + D  +  +   +  LA  P++ + VR+E +    S A     +M D+  +    +V+ E+LRL P      R    D   + + +P G  V   +++  RNP  FP PE + P R+ ERN     + ++ FG G   C GK  A++++LL +HH ++ F   +V   E  D R   R V  P  S
Sbjct:  307 NSIELTAGSVDTTTFPLVMALFELARNPDVQQAVRQESLAAEASVAANPQRAMSDLPLLR---AVLKETLRLYPVGGFLERILSSDLVLQNYHVPAGTLVLLYLYSMGRNPAVFPRPEHYLPQRWLERNG---SFQHLTFGFGVRQCLGKRLAQVEMLLLLHHVLKSF---RVETQEREDVRMVYRFVLAPSSS 491          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP6T1_DROME (Probable cytochrome P450 6t1 OS=Drosophila melanogaster GN=Cyp6t1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15
Identity = 54/176 (30.68%), Postives = 85/176 (48.30%), Query Frame = 3
Query:   24 LLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYE--------GFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            LL A FD  S+TIT  +  LA    I +++R E +  A   +    +S   +  + Y   V+ E LRL PP +   R       Y+         F++  G  V+ S+   +R+ +Y+P+PE FDP RF  E+     P +Y+PFG G   C G    +L+I + + H +  F+ E
Sbjct:  322 LLLAGFDTSSSTITFALYELAKNTTIQDRLRTE-LRAALQSSQDRQLSCDTVTGLVYLRQVVDEVLRLYPPTAFLDRCCNSRTGYDLSPWNGGSPFKLRAGTPVYISVLGIHRDAQYWPNPEVFDPERFSAEQRQQHHPMTYLPFGAGPRGCIGTLLGQLEIKVGLLHILNHFRVE 496          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4F8_HUMAN (Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15
Identity = 51/175 (29.14%), Postives = 88/175 (50.29%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFR-IPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRS 557
            D  ++ ++ ++ NLA  PE  E+ R+E  E+ K + P E +   D+ ++ +    + ESLRL PP     R   +D      R IPKG   + +I A + NP  +P PE +DP RF  E      P +++PF  G   C G+ +A  ++ + +   + +F   ++ PD    +R+
Sbjct:  331 DTTASGLSWVLYNLARHPEYQERCRQEVQELLKDREPKE-IEWDDLAQLPFLTMCLKESLRLHPPIPTFARGCTQDVVLPDSRVIPKGNVCNINIFAIHHNPSVWPDPEVYDPFRFDPENAQKRSPMAFIPFSAGPRNCIGQKFAMAEMKVVLALTLLRF---RILPDHREPRRT 501          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4F3_HUMAN (Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapiens GN=CYP4F3 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.149e-15
Identity = 51/174 (29.31%), Postives = 88/174 (50.57%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERND--PIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKR 554
            D  ++ ++ ++ +LA  PE  E+ R+E  E+ K + P E +   D+ ++ +    I ESLRL PP     R   +D    +G  IPKG     S+  T+ NP  +P PE +DP RF+  +     P +++PF  G   C G+ +A  ++ + +   + +F   +V PD    +R
Sbjct:  331 DTTASGLSWVLYHLAKHPEYQERCRQEVQELLKDREPKE-IEWDDLAQLPFLTMCIKESLRLHPPVPAVSRCCTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPKNIKERSPLAFIPFSAGPRNCIGQAFAMAEMKVVLGLTLLRF---RVLPDHTEPRR 500          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15
Identity = 48/143 (33.57%), Postives = 74/143 (51.75%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYA 467
            D  ++ I+ I+  LA  P+  E+ R+E   I      G  ++   + +M Y+   I E+LRL PP  G  RE      + +G  +PKG  V  SI+  + NP+ +P+PE FDP RF        ++++PF GG   C GK +A
Sbjct:  324 DTTASGISWILYALATHPKHQERCREE---IHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQHSHAFLPFSGGSRNCIGKQFA 463          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15
Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 3
Query:   57 TITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTF-REAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVP---YSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            T +S+   L +L    E + K + EI+++  P       DI+ + Y  +V+ ESLRL PP      RE I+D  + G+ +PK  +V  +  A  R+PE +  P +F P RF  +   V    Y  +PFG G+ +C G       +   +   +R+F+WE
Sbjct:  314 TSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWE 472          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.725e-15
Identity = 52/173 (30.06%), Postives = 84/173 (48.55%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTF-REAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVP---YSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L+ +L A  D  + T+T  M  LA  P + +KV   Q EI         +S +D+ ++ Y   VI E+ RL P       REA+ +F+  G+ IP   ++H ++ A  R+P+ +  PE F P RF  N+       +  +PFGGG+ ICP        +   + + +  F W+
Sbjct:  294 LLDVLLAGIDTSAITMTWAMTELARNPRVMKKV---QSEIRTQMGNRSMISFEDMDQLEYLKMVIKETWRLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWK 463          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: THAH_ARATH (Cytochrome P450 708A2 OS=Arabidopsis thaliana GN=CYP708A2 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 8.783e-15
Identity = 53/182 (29.12%), Postives = 100/182 (54.95%), Query Frame = 3
Query:    6 AKNLV-ALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSK-APGEPMSMKDIK-KMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERND-PIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDE 539
            A NL+ A+L  A ++ S+  +  +K LA+  +   ++++E   I +++   G  +S ++ + +MT++  VI+E+LR+   A   +R+A+ D   +G+ IP GW V     A + N   + +P  F+P R+E  +      +++ FGGG   C G ++A+LQI +F+HH V  + +      E
Sbjct:  275 AINLIFAILVVAKESTSSVTSLAIKFLAENHKALAELKREHAAILQNRNGKGAGVSWEEYRHQMTFTNMVINETLRMANMAPIMYRKAVNDVEIKGYTIPAGWIVAVIPPAVHFNDAIYENPLEFNPWRWEGKELRSGSKTFMVFGGGVRQCVGAEFARLQISIFIHHLVTTYDFSLAQESE 456          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4FE_MOUSE (Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus GN=Cyp4f14 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.783e-15
Identity = 52/174 (29.89%), Postives = 88/174 (50.57%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKR 554
            D  ++ ++ I+ NLA  PE  E+ R+E  E+ + + P E +   D+ ++ +    I ESLRL PP +   R   +D    +G  IPKG     SI   + NP  +P PE +DP RF  E      P +++PF  G   C G+ +A  ++ + +   + +F   ++ PD+   +R
Sbjct:  331 DTTASGLSWILYNLARHPEYQERCRQEVQELLRGREP-EEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQDILLPDGRTIPKGIICLISIFGIHHNPSVWPDPEVYDPFRFDPENIKDSSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF---RLLPDDKEPRR 500          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
C71DF_MENPI3.942e-1526.67Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C11B2_MESAU3.942e-1528.87Cytochrome P450 11B2, mitochondrial OS=Mesocricetu... [more]
CP6T1_DROME5.149e-1530.68Probable cytochrome P450 6t1 OS=Drosophila melanog... [more]
CP4F8_HUMAN5.149e-1529.14Cytochrome P450 4F8 OS=Homo sapiens GN=CYP4F8 PE=1... [more]
CP4F3_HUMAN5.149e-1529.31Leukotriene-B(4) omega-hydroxylase 2 OS=Homo sapie... [more]
CP4AB_HUMAN6.725e-1533.57Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
C76A2_SOLME6.725e-1530.82Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C71BW_ARATH6.725e-1530.06Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
THAH_ARATH8.783e-1529.12Cytochrome P450 708A2 OS=Arabidopsis thaliana GN=C... [more]
CP4FE_MOUSE8.783e-1529.89Leukotriene-B4 omega-hydroxylase 3 OS=Mus musculus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
back to top