BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4AC_RAT (Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14
Identity = 49/159 (30.82%), Postives = 78/159 (49.06%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFK 515
            D  ++ I+ I   LA  PE  +  RKE   I      G  ++  D+ KM Y+   I E+LR+ PP +   R       + +G  +PKG  V  S +  + NP  +P+PE FDP RF        +S++PF GG   C GK +A  ++ + +   + +F+
Sbjct:  322 DTTASGISWIFYALATNPEHQQGCRKE---IQSLLGDGASITWDDLDKMPYTTMCIKEALRIYPPVTAVSRMLSTPVTFPDGRSLPKGITVMLSFYGLHHNPTVWPNPEVFDPYRFAPESSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFE 477          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4A7_RABIT (Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CYP4A7 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14
Identity = 47/143 (32.87%), Postives = 73/143 (51.05%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYA 467
            D  ++ I+ I   LA  PE   + R+E   I      G  ++ + + KM Y+   I E+LRL PP  G   +      + +G  +PKG  +  SI+  + NP+ +P+PE FDPSRF        ++++PF GG   C GK +A
Sbjct:  325 DTTASGISWIFYALATHPEHQHRCREE---IQGLLGDGASITWEHLDKMPYTTMCIKEALRLYPPVPGVGSKLSSPVTFPDGRSLPKGIIITLSIYGLHHNPKVWPNPEVFDPSRFAPGSARHSHAFLPFSGGSRNCIGKQFA 464          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4A6_RABIT (Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CYP4A6 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLV 566
            D  ++ I+ I   LA  PE   + R+E   I      G  ++ + + +M Y+   I E+LRL PP  G  R+      + +G  +PKG  V  SI+A + NP+ +P+PE FDP  F        ++++PF GG   C GK +A  ++ + +   + +F+    +P    D++ RLV
Sbjct:  324 DTTASGISWIFYALATHPEHQHRCREE---IQGLLGDGASITWEHLDQMPYTTMCIKEALRLYPPVPGVGRQLSSPVTFPDGRSLPKGVIVTLSIYALHHNPKVWPNPEVFDPFPFAPGSARHSHAFLPFSGGPRNCIGKQFAMNELKVAVALTLVRFEL-LPDPKRVPDQKPRLV 495          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C524A_DICDI (Probable cytochrome P450 524A1 OS=Dictyostelium discoideum GN=cyp524a1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14
Identity = 52/172 (30.23%), Postives = 87/172 (50.58%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFE---RNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKW 518
            L++ + A+ D  ++++   ++ +A+ P+I  KVR EQ   A  +   E + +  +++ TY+  V+SE LR  PPA     E IED    +   +PKG  +  SI + +     +  P  FDP RF+   + D     + + FG G H C GK+ AK QI +F+       +W
Sbjct:  333 LLSFMFASQDALTSSLVWTVQLMAEHPDILAKVRAEQ---ASLRPNNEKLDLDTMRQATYTRMVVSEILRFRPPAVMVPHENIEDIVIGDNVHVPKGTMILPSIWSAHFQEGGYSDPYKFDPQRFDSVRKEDVTCAKNSLVFGAGPHFCIGKELAKNQIEVFLTKLAMSTEW 501          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C4D14_DROME (Probable cytochrome P450 4d14 OS=Drosophila melanogaster GN=Cyp4d14 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.498e-14
Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFK 515
            D  +++I      LA  PE+  +V +E  ++        P++MK + ++ Y   VI ESLRL P      R   +D   +G  IP    V   I+   R+P+YFP PE F P RF  ER   I P++Y PF  G   C G+ +A L++   +   VR F+
Sbjct:  318 DTTTSSIAFTCYLLARHPEVQARVFQEVRDVIGDDKSA-PVTMKLLGELKYLECVIKESLRLFPSVPIIGRYISQDTVLDGKLIPADSNVIILIYHAQRDPDYFPDPEKFIPDRFSMERKGEISPFAYTPFSAGPRNCIGQKFAMLEMKSTISKMVRHFE 476          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP11A_ONCMY (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Oncorhynchus mykiss GN=cyp11a1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.957e-14
Identity = 48/171 (28.07%), Postives = 87/171 (50.88%), Query Frame = 3
Query:   12 NLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEK 524
            ++  L++   D  S T+   +  LA  P++ E++R E + +A+    G+ + M  +K +      + E+LRL P A    R   E+   + + IP G  V   ++A  R+P+ FP PE + PSR+ R +    +  + FG G   C G+  A+ ++ LF+ H +  F+ +K
Sbjct:  317 SVTELMAGGVDTTSITLLWTLYELARHPDLQEELRAE-VAVARQSTQGDMLQM--LKMIPLVKGALKETLRLHPVAVSLQRYITEEIVIQNYHIPCGTLVQLGLYAMGRDPDVFPRPEKYLPSRWLRTENQY-FRSLGFGFGPRQCLGRRIAETEMQLFLIHMLENFRVDK 483          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C12B2_DROME (Probable cytochrome P450 12b2, mitochondrial OS=Drosophila melanogaster GN=Cyp12b2 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.957e-14
Identity = 53/196 (27.04%), Postives = 94/196 (47.96%), Query Frame = 3
Query:   24 LLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERND--PIV----------PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLVSCP 575
            +L A  D  S+   +I+ +LA  P   EK+R+E + I  +    + ++ ++ K M Y  + I E LR+     G FR   +D    G+++P+G  V   +   + + +YF     F P R+ ++D  P +          P+ Y+PFG G   C GK  A+L+I   +   +R +K   + P+ P +  S ++  P
Sbjct:  328 MLMAGIDTTSSACLTILYHLARNPSKQEKLRRELLRILPTTK--DSLTDQNTKNMPYLRACIKEGLRITSITPGNFRITPKDLVLSGYQVPRGTGVLMGVLELSNDDKYFAQSSEFIPERWLKSDLAPDIQACPAARTRNPFVYLPFGFGPRTCIGKRIAELEIETLLVRLLRSYKVSWL-PETPIEYESTIILSP 520          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14
Identity = 57/192 (29.69%), Postives = 92/192 (47.92%), Query Frame = 3
Query:   18 VALLSAAFDNPSATITSIMKNLADLPEISEKVRKE-QIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPAS--GTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF-----------ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKW----EKVNPDE 539
            V L SA  +  + TI   M  +   P+I E++R+E    + K++   E     D+  + Y  +++ E LRL PP     TF+E  E    +GF IP+  ++  +++A  R+P+++  PE F P RF           +R D +    Y+PFG G+  CPG   A   +   +   V+ F W    EK+N  E
Sbjct:  307 VDLFSAGTEASANTIQWTMAEIIKNPKICERLREEIDSVVGKTRLVQET----DLPNLPYLQAIVKEGLRLHPPGPVVRTFKETCE---IKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDML---KYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWIIKGEKINMKE 488          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP6K1_BLAGE (Cytochrome P450 6k1 OS=Blattella germanica GN=CYP6K1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14
Identity = 47/166 (28.31%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   30 SAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEG--FRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFK 515
            +A F+  + T++  +  L+  P++  ++R E   + K+ + G+P + +D+  M Y   V+SE+LR  PP     R  ++D+   G    I +   V  ++   +R+P+Y+P+PE +DP RF  E       Y+Y+PFG G H C G  +  + +   + H + +F+
Sbjct:  323 TAGFETNATTLSFTLYELSLQPDLQNRLRSEIAGVMKT-SNGKP-TYEDVFGMPYLHMVVSETLRKYPPLPLLDRVCLQDYKVPGTDLIIERDTPVFIALLGLHRDPQYYPNPERYDPERFSEENKRQRKAYTYLPFGEGPHNCIGLRFGYMAVKTALVHMLAEFE 486          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP51_MYCTU (Lanosterol 14-alpha demethylase OS=Mycobacterium tuberculosis GN=cyp51 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14
Identity = 45/140 (32.14%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  129 EIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFE---RNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDE 539
            E+ +    G  +S   ++++    +V+ E+LRL PP     R A  +F  +G RI +G  V  S   +NR PE FP P  F P+R+E   + D +  ++++PFG G+H C G  +A +QI       +R++++E   P E
Sbjct:  285 ELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
CP4AC_RAT1.498e-1430.82Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a... [more]
CP4A7_RABIT1.498e-1432.87Cytochrome P450 4A7 OS=Oryctolagus cuniculus GN=CY... [more]
CP4A6_RABIT1.498e-1430.11Cytochrome P450 4A6 OS=Oryctolagus cuniculus GN=CY... [more]
C524A_DICDI1.498e-1430.23Probable cytochrome P450 524A1 OS=Dictyostelium di... [more]
C4D14_DROME1.498e-1433.13Probable cytochrome P450 4d14 OS=Drosophila melano... [more]
CP11A_ONCMY1.957e-1428.07Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C12B2_DROME1.957e-1427.04Probable cytochrome P450 12b2, mitochondrial OS=Dr... [more]
THAD_ARATH2.555e-1429.69Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
CP6K1_BLAGE2.555e-1428.31Cytochrome P450 6k1 OS=Blattella germanica GN=CYP6... [more]
CP51_MYCTU2.555e-1432.14Lanosterol 14-alpha demethylase OS=Mycobacterium t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
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