BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C88A1_MAIZE (Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.137e-23
Identity = 59/174 (33.91%), Postives = 96/174 (55.17%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEP-MSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNP 533
            LV  L+A  ++           L + P++  + + EQ  I +S    +  ++++D +KM Y   VI E+LRL   +  +FR+A  D    G+ IPKGWKV     + + +P+ +P P  FDPSR+E + P    +++ FG G  +CPG D AKL+I +F+HH +  +K  + NP
Sbjct:  322 LVMYLNAGHESSGHITMWATVFLQENPDMFARAKAEQEAIMRSIPSSQRGLTLRDFRKMEYLSQVIDETLRLVNISFVSFRQATRDVFVNGYLIPKGWKVQLWYRSVHMDPQVYPDPTKFDPSRWEGHSPRAG-TFLAFGLGARLCPGNDLAKLEISVFLHHFLLGYKLARTNP 494          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP26A_HUMAN (Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.144e-22
Identity = 61/181 (33.70%), Postives = 98/181 (54.14%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIE---IAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDP--IVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVN 530
            L ++   LL    +  ++  TS++  L   P + +KVR+E      + KS    + + M+ ++++ Y   VI E+LRL PP  G FR A++ F   G++IPKGW V +SI  T+   E F + E F+P RF    P     +S++PFGGG   C GK++AK+ + +F     R   W+ +N
Sbjct:  290 LKQSSTELLFGGHETTASAATSLITYLGLYPHVLQKVREELKSKGLLCKSNQDNK-LDMEILEQLKYIGCVIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVAEIFTNKEEFNPDRFMLPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLN 469          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C90C1_ARATH (Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 54/171 (31.58%), Postives = 99/171 (57.89%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAP-GEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYS--YVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKW 518
            +V ++    +     +T  +K L+D P    K+ +E +E+ + K   GE     D   ++++ +VI+E+LR+    +G +R+A++D   +G+ IPKGW V  S  + + + + + +P  FDP R++R +     S  + PFGGGQ +CPG + +KL+I +F+HH V ++ W
Sbjct:  316 IVEMMIPGEETMPTAMTLAVKFLSDNPVALAKLVEENMEMKRRKLELGEEYKWTDYMSLSFTQNVINETLRMANIINGVWRKALKDVEIKGYLIPKGWCVLASFISVHMDEDIYDNPYQFDPWRWDRINGSANSSICFTPFGGGQRLCPGLELSKLEISIFLHHLVTRYSW 486          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C72B1_PINTA (Abietadienol/abietadienal oxidase OS=Pinus taeda GN=CYP720B1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.495e-22
Identity = 57/178 (32.02%), Postives = 97/178 (54.49%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIV-PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPN 545
            ++ LL A  +  S  +T  +K L   P+   ++++E   I K+K   + +   D K M ++  VI+E+LRL     G FRE  ED   +   IPKGW V   + AT+ + ++     TF+P R+E +  +   + + PFGGG  +CPG   A+L++ LF+H  + +F+WE +  + P+
Sbjct:  285 ILFLLFAGHETSSRAMTFAIKFLTTCPKALTQMKEEHDAILKAKGGHKKLEWDDYKSMKFTQCVINETLRLGNFGPGVFRETKEDTKVKDCLIPKGWVVFAFLTATHLDEKFHNEALTFNPWRWELDQDVSNNHLFSPFGGGARLCPGSHLARLELALFLHIFITRFRWEALADEHPS 462          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.549e-22
Identity = 62/186 (33.33%), Postives = 100/186 (53.76%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIE---IAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVP-------YSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVN 530
            L ++   LL    +  ++  TS++  L   P + +KVR+E      + KS    + + M+ ++++ Y   VI E+LRL PP  G FR A++ F   G++IPKGW V +SI  T+   + F + E F+P RF     IVP       +S++PFGGG   C GK++AK+ + +F     R   W+ +N
Sbjct:  290 LKQSSTELLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNK-LDMETLEQLKYIGCVIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRF-----IVPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLN 469          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C72B2_PINTA (Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.330e-22
Identity = 59/186 (31.72%), Postives = 103/186 (55.38%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKA--PGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEG-FRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERN----DPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDE 539
            +A  ++ LL A  +  S +++  +K L D P   E+++ E   + K K     + ++  D + + ++  VI E+LR+     G FRE  ED   +G F IP+GW V+  +  T+ + +Y  S   FDP R++ +    + +   S++PFGGG  +CPG   AK+++ LF+H+ V KF+WE +  D+
Sbjct:  281 IADFILFLLFAGHETSSRSMSFAIKFLTDCPRALEELKAEHDALLKRKGNLKNQKLNWDDYQSLKFTQCVIHETLRVGNFGPGVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHLDEKYHSSALKFDPWRWQPHLQDQELLKNPSFMPFGGGARLCPGMHLAKMELALFLHNFVTKFRWEALQDDK 466          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4CU_BLAGE (Cytochrome P450 4c21 OS=Blattella germanica GN=CYP4C21 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.679e-22
Identity = 61/181 (33.70%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIV---PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLVSCP 575
            D  SA +T ++  L   PEI E+  KE  +I +        +M D+  M Y   VI ESLRL P      REA +DF   G+ IP G  + +S+   +RNPE FP+P  F+P  F   D +V   PY+Y+PF  G   C G+ +A L+  + + + +R +++  VN  E +  +  +++ P
Sbjct:  312 DTVSAAMTWLLFELGHHPEIQEEAYKEVQDIFQGS--DRVPTMADLNNMNYLERVIKESLRLHPSVIYFVREAHQDFELGGYTIPAGTNIDFSVPFIHRNPEIFPNPRCFNPDNF-LPDRVVNRHPYAYIPFSAGPRNCIGQRFALLEEKVVLSYLLRHYRFRTVNKREDSKFKLEMINTP 489          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C724B_ORYSJ (Cytochrome P450 724B1 OS=Oryza sativa subsp. japonica GN=CYP724B1 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21
Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = 3
Query:   27 LSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEP 542
            L   ++  S  I+ ++  L    +  E V++E   I   K   E +S +D KKM Y+  VI+E+LR         R+A++D  Y+ + IP GWKV     A + NP    + + F P R+E         + PFGGG  +CPG + AK++   F+HH V  ++W     D P
Sbjct:  286 LLGGYETTSLLISMVVYFLGQSAQDLELVKREHEGIRSKKEKDEFLSSEDYKKMEYTQHVINEALRCGNIVKFVHRKALKDVRYKEYLIPSGWKVLPVFSAVHLNPLLHGNAQQFQPCRWEGASQGTSKKFTPFGGGPRLCPGSELAKVEAAFFLHHLVLNYRWRIDGDDIP 457          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP26A_CHICK (Cytochrome P450 26A1 OS=Gallus gallus GN=CYP26A1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.681e-21
Identity = 57/180 (31.67%), Postives = 96/180 (53.33%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEP--MSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDP--IVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVN 530
            L ++   LL    +  ++  TS++  L    ++ +KVRKE         P +   ++M+ ++++ Y+  VI E+LRL PP  G FR A++     G++IPKGW V +SI  T+   + F   + F+P RF    P     +S++PFGGG   C GK++AK+ + +F     R   W+ +N
Sbjct:  285 LKESATELLFGGHETTASAATSLIAFLGLHHDVLQKVRKELQLKGLLSGPNQEKQLNMEFLEQLKYTGCVIKETLRLSPPVPGGFRIALKTLELNGYQIPKGWNVIYSICDTHDVADLFTDKDEFNPDRFMSPSPEDSSRFSFIPFGGGLRSCVGKEFAKVLLKIFTVELARSCDWQLLN 464          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP26C_HUMAN (Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.201e-21
Identity = 66/205 (32.20%), Postives = 98/205 (47.80%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPG------------------EP-MSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPS-PETFDPSRF-----ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEP 542
            L ++ V LL AAF   ++  TS++  L   P    K+R+E +     +A G                  EP +S+  + ++ Y   V+ E LRL PP SG +R A+  F  +G++IPKGW V +SI  T+     + S PE FDP RF     +       + Y+PFGGG   C G++ A+  + L     VR  +WE   P  P
Sbjct:  286 LKESAVELLFAAFFTTASASTSLVLLLLQHPAAIAKIREELVAQGLGRACGCAPGAAGGSEGPPPDCGCEPDLSLAALGRLRYVDCVVKEVLRLLPPVSGGYRTALRTFELDGYQIPKGWSVMYSIRDTHETAAVYRSPPEGFDPERFGAAREDSRGASSRFHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWELATPAFP 490          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
C88A1_MAIZE5.137e-2333.91Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 S... [more]
CP26A_HUMAN1.144e-2233.70Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE... [more]
C90C1_ARATH1.495e-2231.58Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=RO... [more]
C72B1_PINTA1.495e-2232.02Abietadienol/abietadienal oxidase OS=Pinus taeda G... [more]
CP26A_MOUSE2.549e-2233.33Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE... [more]
C72B2_PINTA3.330e-2231.72Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 P... [more]
CP4CU_BLAGE5.679e-2233.70Cytochrome P450 4c21 OS=Blattella germanica GN=CYP... [more]
C724B_ORYSJ1.265e-2131.98Cytochrome P450 724B1 OS=Oryza sativa subsp. japon... [more]
CP26A_CHICK3.681e-2131.67Cytochrome P450 26A1 OS=Gallus gallus GN=CYP26A1 P... [more]
CP26C_HUMAN8.201e-2132.20Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
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