BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C87A3_ORYSJ (Cytochrome P450 87A3 OS=Oryza sativa subsp. japonica GN=CYP87A3 PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.071e-20
Identity = 58/191 (30.37%), Postives = 97/191 (50.79%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKS-KAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIV--PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLVSCPG 578
            +  LL A+F+  +  +T  +K L + P++ + +R+E   I ++ K P   ++  + K MT++  VI E +RL     G FR+A++D   +G+ IP GW +     A + NPE +  P  F+P R++    I      ++ FGGG   C G D +K+ +  F+H  V K+ W  V       K   +V  PG
Sbjct:  316 MFVLLFASFETTALALTIGVKLLTENPKVVDALREEHEAIIRNRKDPNSGVTWAEYKSMTFTSQVIMEIVRLANIVPGIFRKALQDVEIKGYTIPAGWGIMVCPPAVHLNPEIYEDPLAFNPWRWQGKPEITGGTKHFMAFGGGLRFCVGTDLSKVLMATFIHSLVTKYSWRTV-------KGGNIVRTPG 499          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.943e-20
Identity = 58/180 (32.22%), Postives = 92/180 (51.11%), Query Frame = 3
Query:   24 LLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIV-----PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPND 548
            + +A  D  ++T+   M  +   P++ EK + E  +I K K   E +   D+++++Y  SVI E+LRL PP+    RE I   N +G+ IP   KV  +  A  R+P+Y+   + F P RF  ND  +      + Y+PFG G+ +CPG  +    I L +   +  F WE  N  +P D
Sbjct:  303 IFAAGTDTSASTLEWAMSEMMKNPKVKEKAQAELRQIFKGK---EIIRETDLEELSYLKSVIKETLRLHPPSQLIPRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERF--NDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPED 477          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP343_HUMAN (Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.184e-19
Identity = 58/175 (33.14%), Postives = 92/175 (52.57%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER--NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L    + ++ AA+D  S T+  IM  LA  P++ +K+++E   +  +KAP   ++   + +M Y   V++E+LRL P  S   R   +D    G  IPKG  V   I+A + +P+Y+  PE F P RF +   D I  Y Y+PFG G   C G  +A   I L +  A++ F ++
Sbjct:  295 LVAQSIIIIFAAYDTTSTTLPFIMYELATHPDVQQKLQEEIDAVLPNKAP---VTYDALVQMEYLDMVVNETLRLFPVVSRVTRVCKKDIEINGVFIPKGLAVMVPIYALHHDPKYWTEPEKFCPERFSKKNKDSIDLYRYIPFGAGPRNCIGMRFALTNIKLAVIRALQNFSFK 466          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: THAS_PIG (Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.547e-19
Identity = 58/167 (34.73%), Postives = 92/167 (55.09%), Query Frame = 3
Query:   27 LSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L A ++  + T++ +   LA  P+  EK+ +E  + +K     E  S++  + + Y   V+SE+LR+ PPA    REA  D    G RIP G  +  ++ A + +P+++P PETFDP RF  E      P++Y+PFG G   C G     L+I L + H +RKF++E
Sbjct:  340 LIAGYEIITNTLSFVTYLLATNPDCQEKLLREVDDFSKKHPSPEHCSLQ--QGLPYLDMVLSETLRMYPPAFRFTREAARDCEVLGQRIPAGTVLEVAVGALHHDPKHWPHPETFDPERFTAEAQRLQQPFTYLPFGAGPRSCLGVQLGLLEIKLTLLHILRKFRFE 504          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AP_MOUSE (Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.877e-19
Identity = 61/172 (35.47%), Postives = 88/172 (51.16%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKF 512
            +A   V  +   +D  S +I+ IM  LA  P++ +K++ E      +KAP    ++ D   M Y   V++ESLRL P A    R + +D    G  IPKG  V   I+  +RNPEY+P P+ F P RF  E    I PY Y+PFG G   C G  +A + I L +   ++ F
Sbjct:  295 MAAQAVIFIFGGYDATSTSISLIMYELATHPDVQKKLQDEIDRTLPNKAPVTYDALMD---MEYLDMVVNESLRLYPIAIRLERVSKKDVEINGVFIPKGTVVMIPIYPLHRNPEYWPEPQEFCPERFSKENKGNIDPYIYMPFGNGPRNCIGMRFALISIKLAVIGVLQNF 463          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP51_MYCVP (Lanosterol 14-alpha demethylase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=cyp51 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.676e-19
Identity = 56/177 (31.64%), Postives = 95/177 (53.67%), Query Frame = 3
Query:   18 VALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER---NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDE 539
            ++L+ A     S T +  +  L   PE   KV++E  ++    A G+ +S   ++++    + + E+LRL PP     R A ++F   G+ I KG  V  S   +NR PE FP+P+ FDP R+E+    D I  ++++PFG G+H C G  +A++QI       +R++++E   P E
Sbjct:  252 ISLMFAGHHTSSGTSSWTLIELLRHPEFYAKVQQELDDLY---ADGQEVSFHALRQIPSLDNALKETLRLHPPLIILMRVAQDEFEVAGYPIHKGQMVAASPAISNRIPEDFPNPDDFDPDRYEKPRQEDLINRWTWIPFGAGKHRCVGAAFAQMQIKAIFSVLLREYEFEMAQPPE 425          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AI_RAT (Cytochrome P450 3A18 OS=Rattus norvegicus GN=Cyp3a18 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.676e-19
Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKF 512
            +A   +  +   +D  S +I+ IM  LA  P + +K++ E      +KAP   ++   + +M Y   V++ESLRL P A+   R + +D    G  IPKG  V   I+  +RNPEY+  PE F+P RF  E    I PY Y+PFG G   C G  +A + + L +   ++ F
Sbjct:  295 MAAQAIIFIFGGYDATSTSISFIMYELATRPNVQKKLQNEIDRALPNKAP---VTYDALMEMEYLDMVVNESLRLYPIATRLDRVSKKDVEINGVFIPKGTVVTIPIYPLHRNPEYWLEPEEFNPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALISMKLAVIGVLQNF 463          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP11A_DASAM (Cholesterol side-chain cleavage enzyme, mitochondrial (Fragment) OS=Dasyatis americana GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.309e-18
Identity = 59/185 (31.89%), Postives = 96/185 (51.89%), Query Frame = 3
Query:   12 NLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLV 566
            +++ ++S A D  S T+  +M  LA  P I + VR E +E A  K  G+P+ M  +K +     V+ E+LRL P A    R   ED   + + IP G  V   ++A  RNP+ F +PE ++P R+ + +    + ++ FG G   C G+  A+ Q++L M H ++ FK E     E   K S ++
Sbjct:  320 SIIDVMSGAIDTTSTTVHWMMYELAKHPHIQKNVRSEIME-AHQKTEGDPVKM--LKSVPLLKCVVKETLRLYPVAISIQRYLNEDTVLQNYHIPAGTLVQLGLYAMGRNPKIFKNPEQYNPERWLKGED-THFRHLGFGFGPRQCIGRRIAETQMVLLMIHMLQNFKIETDPMTEVKSKFSLIL 500          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4D2_DROME (Cytochrome P450 4d2 OS=Drosophila melanogaster GN=Cyp4d2 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.233e-18
Identity = 54/180 (30.00%), Postives = 92/180 (51.11%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDP-IVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLVSCPG 578
            D  ++ I+  +  ++  PE+ +++++E I     +    P++++D+ ++ +  +VI ESLRL PP     R   ED    G  IP G      I    R+PEYF SP+ F P RF+ + P I PY+Y+PF  G   C G+ +A L++   +   +R F+   + P+  +     L S  G
Sbjct:  314 DTTTSAISFCLYEISRHPEVQQRLQQE-IRDVLGEDRKSPVTLRDLGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEFRPERFDADVPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLPLGPEPRHSMNIVLRSANG 492          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP51_WHEAT (Obtusifoliol 14-alpha demethylase (Fragment) OS=Triticum aestivum GN=CYP51 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.810e-18
Identity = 66/198 (33.33%), Postives = 96/198 (48.48%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY---EG--FRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF----ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLVSCPGD 581
            L+A L A     S T T     L    +   +  +EQ E+ K    G+ +    + +M      I E+LRL PP     R++  DF+    EG  F IPKG  V  S    NR P  F +P+++DP RF    E +     +SY+ FGGG+H C G+ +A LQI     H +R F++E V+P   ND  + +V   G+
Sbjct:  244 LIAALFAGQHTSSITSTWTGAYLLKFQQYFAEAVEEQKEVMKRH--GDKIDHDILAEMDVLYRCIKEALRLHPPLIMLLRQSHSDFSVTTREGKEFDIPKGHIVATSPAFANRLPHIFKNPDSYDPDRFAAGREEDKVAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFEFELVSPFPENDWNAMVVGIKGE 439          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
C87A3_ORYSJ1.071e-2030.37Cytochrome P450 87A3 OS=Oryza sativa subsp. japoni... [more]
C71D8_SOYBN6.943e-2032.22Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
CP343_HUMAN1.184e-1933.14Cytochrome P450 3A43 OS=Homo sapiens GN=CYP3A43 PE... [more]
THAS_PIG1.547e-1934.73Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=... [more]
CP3AP_MOUSE5.877e-1935.47Cytochrome P450 3A25 OS=Mus musculus GN=Cyp3a25 PE... [more]
CP51_MYCVP7.676e-1931.64Lanosterol 14-alpha demethylase OS=Mycobacterium v... [more]
CP3AI_RAT7.676e-1933.72Cytochrome P450 3A18 OS=Rattus norvegicus GN=Cyp3a... [more]
CP11A_DASAM1.309e-1831.89Cholesterol side-chain cleavage enzyme, mitochondr... [more]
CP4D2_DROME2.233e-1830.00Cytochrome P450 4d2 OS=Drosophila melanogaster GN=... [more]
CP51_WHEAT3.810e-1833.33Obtusifoliol 14-alpha demethylase (Fragment) OS=Tr... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
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