BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C6A13_DROME (Probable cytochrome P450 6a13 OS=Drosophila melanogaster GN=Cyp6a13 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.810e-18
Identity = 50/178 (28.09%), Postives = 94/178 (52.81%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRI--PKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIV--PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEK 524
            +A   +    A FD  S T++  +  LA  P++ E++R E + + K     + ++   +++M Y   V++E+LR  P      R + +++      +    G K+   +H+ + +PE +P PE FDPSRFE  +     P++Y+PFG G   C G+ + KLQ+ + + + +R FK+ +
Sbjct:  285 IAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQERLRVEVLAVLKRN--NQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSNLILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEPEEIKARHPFAYLPFGEGPRNCIGERFGKLQVKVGLVYLLRDFKFSR 460          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: THAS_HUMAN (Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 59/169 (34.91%), Postives = 96/169 (56.80%), Query Frame = 3
Query:   27 LSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSK--APGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L A ++  + T++     LA  P+  EK+ +E +++ K K  AP E  S+++   + Y   VI+E+LR+ PPA    REA +D    G RIP G  +  ++ A + +PE++PSPETF+P RF  E      P++Y+PFG G   C G     L++ L + H + KF+++
Sbjct:  339 LIAGYEIITNTLSFATYLLATNPDCQEKLLRE-VDVFKEKHMAP-EFCSLEE--GLPYLDMVIAETLRMYPPAFRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPETFNPERFTAEARQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQ 503          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP136_MYCTU (Putative cytochrome P450 136 OS=Mycobacterium tuberculosis GN=cyp136 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.498e-18
Identity = 54/181 (29.83%), Postives = 93/181 (51.38%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERND-PIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPD 536
            +  +++ L+ AA D  ++T T++   LA  PE  ++ R E       +    P+ ++ ++++     V++ES+RL  P     R+ + D    G+ +PKG  V       +R PE +  P TFDP RF   RN+     Y++ PFGGG H C G  + +L+I   +H  +R+++ E   PD
Sbjct:  293 IVNHMIFLMMAAHDTSTSTATTMAYQLAAHPEWQQRCRDES-----DRHGDGPLDIESLEQLESLDLVMNESIRLVTPVQWAMRQTVRDTELLGYYLPKGTNVIAYPGMNHRLPEIWTDPLTFDPERFTEPRNEHKRHRYAFTPFGGGVHKCIGMVFDQLEIKTILHRLLRRYRLELSRPD 468          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP9E2_BLAGE (Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9E2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18
Identity = 56/181 (30.94%), Postives = 96/181 (53.04%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYE---GFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVN 530
            L    V    A FD  S  +  +   LA  P++  +++ E I+ +  +  G+ ++ + I  M Y   V+SESLRL PPA  T R+ ++++       + +  G  V   I+A + +P+Y+P+PE FDP RF  E  D I P++Y+PFG G   C G  +A ++  + + H + +F  + V+
Sbjct:  324 LTAQAVLFFFAGFDTASTLLCFMSHLLATNPDVQNRLQDE-IDQSLEENDGK-LTYEAIHSMKYLDMVVSESLRLYPPAIFTDRKCVKNYRLPMEPSYTLEPGDAVWIPIYAIHHDPKYYPNPEKFDPERFSDENKDNIKPFTYLPFGSGPRNCIGNRFALMESKIALVHLLCRFNLKVVS 502          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18
Identity = 55/175 (31.43%), Postives = 91/175 (52.00%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERN--DPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L    +  + A ++  S+T++ IM  LA  P++ +K+++E   +  +KAP    +   + +M Y   V++E+LRL P A    R   +D    G  IPKG  V    +A + +P+Y+  PE F P RF +N  D I PY Y PFG G   C G  +A + + L +   ++ F ++
Sbjct:  295 LVAQSIIFIFAGYETTSSTLSFIMYELATHPDVQQKLQEEIDAVLPNKAPA---TYDTVLQMEYLDMVVNETLRLFPLAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYWTEPEKFLPERFSKNNKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 466          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18
Identity = 52/178 (29.21%), Postives = 90/178 (50.56%), Query Frame = 3
Query:   27 LSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAI-EDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYS------YVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDE 539
            L+A  D  +  +  IM NL   PEI E++ +E   +   +A  + +  +D++KM Y  +V+ E LR  PP       ++ ED    G+++PK   +++ +    R+P  +  P  F P RF   +  V  +       +PFG G+ ICPG   A L +  ++ + VR+F+W++V   E
Sbjct:  304 LTAGTDTTATALQWIMANLVKYPEIQERLHEEIKSVVGEEA--KEVEEEDVEKMPYLKAVVLEGLRRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHE 479          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18
Identity = 57/173 (32.95%), Postives = 90/173 (52.02%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASG-TFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERND---PIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L+ +L A  D    TIT +M +L   P + +K + E  E+ K+K   + ++ +DI+ + Y   V+ E+LR+ P     T REA +D    G+ IPK   +H +I A +RNP  +  PE F P RF  N      + +  +PFG G+ ICPG       I L + + + +F W+
Sbjct:  291 LLDILLAGVDTSGHTITWVMTHLIKNPRVMKKAQAEVREVIKNK---DNITEEDIEGLEYLKMVVKETLRINPLVPLLTPREASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWK 460          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP9B2_DROME (Cytochrome P450 9b2 OS=Drosophila melanogaster GN=Cyp9b2 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17
Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   33 AAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEG------FRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            AAF+N S  I +    L   P++ E++ +E +E  K+   G P++   ++KMTY   VISESLR    A+ T R   +D+          F    G +++  I   + +  YFP P  FDP RF  ER   +VPY+Y+PFG G   C G  YA +Q+   + + +  +K E
Sbjct:  304 AAFENNSNLICTTTYELLYNPDVQERLYEEIVETKKA-LNGAPLTYDAVQKMTYMDMVISESLRKWTLAAATDRLCSKDYTLTDDDGTKLFDFKVGDRINIPISGLHLDDRYFPEPRKFDPDRFSEERKGDMVPYTYLPFGVGPRNCIGNRYALMQVKGMLFNLLLHYKIE 473          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3A8_MACFA (Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3A8 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.108e-17
Identity = 53/175 (30.29%), Postives = 91/175 (52.00%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER--NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            L    +  + A ++  S+ ++ I+  LA  P++ +K+++E   +  +KAP    +   + +M Y   V++E+LR+ P A    R   +D    G  IPKG  V    +A + +P+Y+P PE F P RF +  ND I PY Y PFG G   C G  +A + + L +   ++ F ++
Sbjct:  295 LVAQSIIFIFAGYETTSSVLSFIIYELATHPDVQQKLQEEIDTVLPNKAPP---TYDTVLQMEYLDMVVNETLRIFPIAMRLERVCKKDVEINGIFIPKGVVVMIPSYALHHDPKYWPEPEKFLPERFSKKNNDNIDPYIYTPFGSGPRNCIGMRFALMNMKLAIIRVLQNFSFK 466          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP26B_HUMAN (Cytochrome P450 26B1 OS=Homo sapiens GN=CYP26B1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.448e-17
Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEP----MSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER---NDPIVPYSYVPFGGGQHICPGKDYAKL 473
            L    + L+ AA+   ++  TS++  L   P + EK+R E        + G P    + +  +  + Y   VI E +RL  P SG +R  ++ F  +GF+IPKGW V +SI  T+     F     FDP RF +    D    + Y+PFGGG   C GK  AKL
Sbjct:  286 LKDGTLELIFAAYATTASASTSLIMQLLKHPTVLEKLRDELRAHGILHSGGCPCEGTLRLDTLSGLRYLDCVIKEVMRLFTPISGGYRTVLQTFELDGFQIPKGWSVMYSIRDTHDTAPVFKDVNVFDPDRFSQARSEDKDGRFHYLPFGGGVRTCLGKHLAKL 449          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
C6A13_DROME3.810e-1828.09Probable cytochrome P450 6a13 OS=Drosophila melano... [more]
THAS_HUMAN6.498e-1834.91Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 P... [more]
CP136_MYCTU6.498e-1829.83Putative cytochrome P450 136 OS=Mycobacterium tube... [more]
CP9E2_BLAGE8.487e-1830.94Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9... [more]
CP3AL_CALJA8.487e-1831.43Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]
C89A2_ARATH8.487e-1829.21Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C71BD_ARATH8.487e-1832.95Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
CP9B2_DROME1.108e-1733.92Cytochrome P450 9b2 OS=Drosophila melanogaster GN=... [more]
CP3A8_MACFA1.108e-1730.29Cytochrome P450 3A8 OS=Macaca fascicularis GN=CYP3... [more]
CP26B_HUMAN1.448e-1733.54Cytochrome P450 26B1 OS=Homo sapiens GN=CYP26B1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
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