BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP26B_DANRE (Cytochrome P450 26B1 OS=Danio rerio GN=cyp26b1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17
Identity = 60/168 (35.71%), Postives = 85/168 (50.60%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSK----APGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERN-DPIVPYSYVPFGGGQHICPGKDYAKLQILL 485
            L ++ + L+ AAF   ++  TS++  L   P + EK+R+E              GE + +  I  + Y   VI E LRL  P SG +R A + F  +G ++PKGW V +SI  T+     F   E FDP RF  ER+ D    + Y+PFGGG   C GK  A L + L
Sbjct:  286 LKESTIELIFAAFATTASASTSLVMQLLRHPAVLEKLREELRSCGLLHDGCLCQGE-LRLDSIISLKYLDCVIKEVLRLFAPVSGGYRIATQTFELDGVQVPKGWSVMYSIRDTHDTSAVFKDVEAFDPDRFSPERSEDREGRFHYLPFGGGVRSCLGKQLATLFLKL 452          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: THAS_RAT (Thromboxane-A synthase OS=Rattus norvegicus GN=Tbxas1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17
Identity = 61/194 (31.44%), Postives = 96/194 (49.48%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDE-PNDKRSRLVSCP 575
            +A      L A  +  + T++ I   LA  PE  E++ KE +++   K P  P      + + Y   V++E+LR+ PPA    REA +D    G  IP G  +  ++ A + +PE++P+PETFDP RF  E      P++Y+PFG G   C G     L + L +   + KF++E     + P    S+   CP
Sbjct:  331 IAGQAFLFLIAGHEITTNTLSFITYLLATHPECQERLLKE-VDLFMEKHPA-PEYCNLQEGLPYLDMVVAETLRMYPPAFRFTREAAQDCEVLGQHIPAGSVLEIAVGALHHDPEHWPNPETFDPERFTAEARLQQKPFTYLPFGAGPRSCLGVRLGLLVVKLTLLQVLHKFRFEACPETQVPLQLESKSALCP 522          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP46A_HUMAN (Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP46A1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17
Identity = 51/175 (29.14%), Postives = 87/175 (49.71%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKV 527
            L  N V    A  +  +  +   +  L+  PEI  +++ E  E+  SK     +  +D+ ++ Y   V+ ESLRL PPA GTFR   E+   +G R+P    + +S +   R   YF  P TF+P RF    P   ++Y PF  G   C G+ +A++++ + M   +++ ++  V
Sbjct:  292 LLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSK---RYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV 463          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AA_MESAU (Lithocholate 6-beta-hydroxylase OS=Mesocricetus auratus GN=CYP3A10 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.212e-17
Identity = 58/190 (30.53%), Postives = 93/190 (48.95%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLV 566
            +A   +  + A +++ S +I  ++  LA  P++ +K+  E      +KAP   ++   +  M Y   VI+E LRL P A+   R + +     G  IPKG  V    +  +R+PEY+P PE F P RF  E    I PY Y+PFG G   C G  +A L + L +   ++ F  +     E + K +R +
Sbjct:  295 MAAQAIIFIFAGYESTSTSICLVLYELATHPDVQKKLHDEIDSALPNKAP---VTYDVLMGMEYLDMVINEGLRLYPIANRLERISKKAVEINGLFIPKGITVMVPTYPLHRDPEYWPEPEEFRPERFSKENKGSIDPYVYMPFGNGPRNCIGMRFALLSMKLAVVSVLQNFTLQTCEQTENHLKFARQI 481          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: THAS_MOUSE (Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17
Identity = 56/158 (35.44%), Postives = 88/158 (55.70%), Query Frame = 3
Query:   57 TITSIMKNLADLPEISEKVRKEQIEIAKSKAPG-EPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIV--PYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            T++ I   LA  P+  E++ KE +++   K P  E  S+++   + Y   VISE+LR+ PPA    REA +D    G RIP G  +  ++ A + +PE++P+PETFDP RF     +   P++Y+PFG G   C G     L + L +   + KF++E
Sbjct:  349 TLSFITYLLATHPDCQERLLKE-VDLFMGKHPAPEYHSLQE--GLPYLDMVISETLRMYPPAFRFTREAAQDCEVLGQRIPAGTVLEIAVGALHHDPEHWPNPETFDPERFTAEARLQRRPFTYLPFGAGPRSCLGVRLGLLVVKLTILQVLHKFRFE 503          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP51_DICDI (Probable lanosterol 14-alpha demethylase OS=Dictyostelium discoideum GN=cyp51 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17
Identity = 60/187 (32.09%), Postives = 96/187 (51.34%), Query Frame = 3
Query:   15 LVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRLVSCP 575
            ++ LL A     S T+T  +  L +  E  ++ +K+  +I + +  GE ++   +K+M    +VI E LRL PP     R+ +    Y+G  IP G  +  S     R P  + +P++F+P RF+  D   P+S++ FGGG+H CPG+++  LQI         K+  E V P  P D  S LV+ P
Sbjct:  271 MIGLLFAGQHTSSITLTYTIFYLLNNLEYFDETQKDINDIVQKENQGE-INFDGLKRMNRLETVIREVLRLHPPLIFLMRKVMTPMEYKGKTIPAGHILAVSPQVGMRLPTVYKNPDSFEPKRFDVEDK-TPFSFIAFGGGKHGCPGENFGILQIKTIWTVLSTKYNLE-VGPVPPTDFTS-LVAGP 453          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4V2_HUMAN (Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17
Identity = 59/176 (33.52%), Postives = 85/176 (48.30%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSRL 563
            D  +A I   +  L   PE+ +KV  E  ++        P +++D+KK+ Y   VI E+LRL P      R   ED    G+R+ KG +     +A +R+P YFP+PE F P RF  E      PY+YVPF  G   C G+ +A ++    +   +R F W      E N KR  L
Sbjct:  332 DTTAAAINWSLYLLGSNPEVQKKVDHELDDVFGKS--DRPATVEDLKKLRYLECVIKETLRLFPSVPLFARSVSEDCEVAGYRVLKGTEAVIIPYALHRDPRYFPNPEEFQPERFFPENAQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILSCILRHF-W-----IESNQKREEL 499          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4F5_RAT (Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17
Identity = 56/174 (32.18%), Postives = 88/174 (50.57%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKR 554
            D  ++ ++ I+ NLA  PE  E+ R+E  E+ + + P E +   D+ ++ +    I ESLRL PPA    R   +D    +G  IPKG     SI   + NP  +P PE FDP RF  E      P S++PF  G   C G+ +A  ++ + +   + +F   +V PD+   +R
Sbjct:  333 DTTASALSWILYNLARHPEYQERCRQEVWELLRDREP-EEIEWDDLAQLPFLTMCIKESLRLHPPAIDLLRRCTQDIVLPDGRVIPKGNICVISIFGIHHNPSVWPDPEVFDPFRFDSENRQKRSPLSFIPFSAGPRNCIGQTFAMNEMKVVVALTLLRF---RVLPDDKEPRR 502          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17
Identity = 47/164 (28.66%), Postives = 87/164 (53.05%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY------EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFK 515
            D  ++ ++  +  L+  PE+  K+ +E +++  +     P+S++D+ ++ Y   VI ESLR+ PP     R+   DF Y      +G  IP G ++   I   +R PE FP+P+ F P R E    + P+  +PF  G   C G+ +A+L++ + +   VR+++
Sbjct:  270 DTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDR-SRPVSIRDLGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYE 431          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4AA_MOUSE (Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.501e-17
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFK 515
            D  ++ ++ I   LA  P+  ++ R+E   +      G  ++   + ++ Y+   I E+LRL PP  G  RE      + +G  +PKG +V  SI+  + NP+ +P+PE FDPSRF  + P   +S++PF GG   C GK +A  ++ + +   + +F+
Sbjct:  323 DTTASGVSWIFYALATHPDHQQRCREE---VQSLLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGVQVTLSIYGLHHNPKVWPNPEVFDPSRFAPDSPRHSHSFLPFSGGARNCIGKQFAMSELKVIVALTLLRFE 478          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
CP26B_DANRE3.225e-1735.71Cytochrome P450 26B1 OS=Danio rerio GN=cyp26b1 PE=... [more]
THAS_RAT4.212e-1731.44Thromboxane-A synthase OS=Rattus norvegicus GN=Tbx... [more]
CP46A_HUMAN4.212e-1729.14Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP4... [more]
CP3AA_MESAU4.212e-1730.53Lithocholate 6-beta-hydroxylase OS=Mesocricetus au... [more]
THAS_MOUSE5.501e-1735.44Thromboxane-A synthase OS=Mus musculus GN=Tbxas1 P... [more]
CP51_DICDI5.501e-1732.09Probable lanosterol 14-alpha demethylase OS=Dictyo... [more]
CP4V2_HUMAN5.501e-1733.52Cytochrome P450 4V2 OS=Homo sapiens GN=CYP4V2 PE=1... [more]
CP4F5_RAT5.501e-1732.18Cytochrome P450 4F5 OS=Rattus norvegicus GN=Cyp4f5... [more]
CP4D8_DROME5.501e-1728.66Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]
CP4AA_MOUSE5.501e-1730.19Cytochrome P450 4A10 OS=Mus musculus GN=Cyp4a10 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
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