BQ623847

Overview
NameBQ623847
Unique NameBQ623847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.225e-16
Identity = 48/176 (27.27%), Postives = 86/176 (48.86%), Query Frame = 3
Query:   30 SAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFE---RNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPND 548
            SA  +  S T   +M  L   P +  K + E     K K     + + D++++ Y  SV+ E++R+ PP     R   E+    G++IP   ++  ++ +  RNP Y+  PETF P RF+   R+     + ++PFG G+ ICPG ++    + + +   +  F W+     +P+D
Sbjct:  297 SAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTS---VDVDDVQELKYMKSVVKETMRMHPPIPLIPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSD 469          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.225e-16
Identity = 48/176 (27.27%), Postives = 86/176 (48.86%), Query Frame = 3
Query:   30 SAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFE---RNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPND 548
            SA  +  S T   +M  L   P +  K + E     K K     + + D++++ Y  SV+ E++R+ PP     R   E+    G++IP   ++  ++ +  RNP Y+  PETF P RF+   R+     + ++PFG G+ ICPG ++    + + +   +  F W+     +P+D
Sbjct:  297 SAGTETSSTTTLWVMAELMRNPAVMAKAQAEVRAALKGKTS---VDVDDVQELKYMKSVVKETMRMHPPIPLIPRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSD 469          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4CA_MOUSE (Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 51/159 (32.08%), Postives = 80/159 (50.31%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFK 515
            D  ++ I+ I   LA  PE  ++ RKE   I      G  ++  D+ KM Y+   I E+LR+ PP     RE      + +G  +PKG  V  S +  + NP  +P+PE FDPSRF        +S++PF GG   C GK +A  ++ + +   + +F+
Sbjct:  322 DTTASGISWIFYALATNPEHQQRCRKE---IQSLLGDGTSITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEVFDPSRFAPGSSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFE 477          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AS_BOVIN (Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 52/163 (31.90%), Postives = 84/163 (51.53%), Query Frame = 3
Query:   39 FDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERN--DPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            ++  S+T++ I+  L   P + +K+++E      +KAP    +   + +M Y   V++E+LR+ P A    R   +D    G  IPKG  V   +   + NPE +P PE F P RF +N  D I PY Y+PFG G   C G  +A + I L +   ++ F ++
Sbjct:  307 YETTSSTLSFIIYELTTHPHVQQKLQEEIDATFPNKAPP---TYDALVQMEYLDMVVNETLRMFPIAGRLERVCKKDVEIHGVTIPKGTTVLVPLFVLHNNPELWPEPEEFRPERFSKNNKDSINPYVYLPFGTGPRNCLGMRFAIMNIKLALVRILQNFSFK 466          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AJ_CAPAE (Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus GN=CYP3A19 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 52/174 (29.89%), Postives = 86/174 (49.43%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER--NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKW 518
            L       +   ++  S +++ I+  LA  P++ +K+++E      +KAP    +   + +M Y   V++E+LR+ P A    R   +D    G  IPKG  V   +   + NPE++P PE F P RF +   D I PY Y+PFG G   C G  +A + I L +   ++ F +
Sbjct:    6 LVAQTTIFIFGGYETTSTSLSFIIYELATHPDVQQKLQEEIDATFPNKAPP---TYDALVQMEYLDMVVNETLRMFPIAGRLERLCKKDVEIHGVSIPKGTTVMVPLFVLHNNPEFWPEPEEFRPERFSKKNKDGINPYVYLPFGTGPRNCVGMRFALMNIKLALVRILQNFSF 176          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP341_MOUSE (Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 55/183 (30.05%), Postives = 93/183 (50.82%), Query Frame = 3
Query:   18 VALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKRSR 560
            +  + A ++  S+T++  +  LA  P+I +K+++E  E   +KAP    +   + +M Y   V++E+LRL P  +   R   +D    G  IPKG  V    +A + +P+++P PE F P RF  E    I PY Y+PFG G   C G  +A + + L +   ++ F ++     +   K SR
Sbjct:  301 IVFIFAGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKAPP---TYDTVMEMEYLDMVLNETLRLYPIGNRLERFCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWPEPEEFQPERFSKENKGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQPCQETQIPLKLSR 480          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: C340_ORYLA (Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.601e-16
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 3
Query:   33 AAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRF--ERNDPIVPYSYVPFGGGQHICPGKDYAKLQILL 485
            A ++  S+++T +  NLA  PE+ +K++KE      +KAP + + + +   M Y   V++ESLRL P A+   R A       G  IPK   V       +R+PE +P PE F P RF  E  D   PY+Y+PFG G   C G  +A + + L
Sbjct:  306 AGYETTSSSLTFLAYNLATNPEVMKKLQKEIDATFPNKAPVQYVPLME---MEYLDCVVNESLRLYPIAARLERVAKATVEVNGLVIPKDMVVMVPTWPLHRDPELWPEPEKFKPERFSKENKDTFDPYTYMPFGAGPRNCIGMRFALVMMKL 455          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: ERG5_SCHPO (Cytochrome P450 61 OS=Schizosaccharomyces pombe GN=erg5 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.090e-16
Identity = 55/182 (30.22%), Postives = 96/182 (52.75%), Query Frame = 3
Query:    3 LAKNLVALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERND--PIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE-KVNPD 536
            ++   ++ L A+ D  S+ +T + + LAD P++ +KVR+EQ+ I K      P+S+  ++KMTY+ +V+ E LRL PP         + F     + +PK   V  +++    + + +P PETF+P R+  N      P +++ FG G H+C G+ YA   ++  +  A     W+ K  PD
Sbjct:  309 ISLTFLSFLFASQDATSSAMTWLFQLLADHPDVLQKVREEQLRIRKGDI-DVPLSLDLMEKMTYTRAVVKECLRLRPPVLMVPYRVKKAFPITPDYTVPKDAMVIPTLYGALHDSKVYPEPETFNPDRWAPNGLAEQSPKNWMVFGNGPHVCLGQRYAVNHLIACIGKASIMLDWKHKRTPD 489          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.090e-16
Identity = 49/170 (28.82%), Postives = 89/170 (52.35%), Query Frame = 3
Query:   18 VALLSAAFDNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNYEGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFER--NDPIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWE 521
            +  + A ++  S+ ++ +   LA  P++ +K+++E      +KAP    +   + +M Y   V++E+LRL P A+   R   +D    G  +PKG  V   +   +R+P+ +P PE F P RF +   D I PY+Y+PFG G   C G  +A + + L +   ++ F ++
Sbjct:  300 IIFIFAGYETTSSALSLLAYELATHPDVQQKLQEEIEATFPNKAPP---TYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Match: CP4F3_RAT (Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus norvegicus GN=Cyp4f3 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.730e-16
Identity = 53/174 (30.46%), Postives = 92/174 (52.87%), Query Frame = 3
Query:   42 DNPSATITSIMKNLADLPEISEKVRKEQIEIAKSKAPGEPMSMKDIKKMTYSMSVISESLRLEPPASGTFREAIEDFNY-EGFRIPKGWKVHWSIHATNRNPEYFPSPETFDPSRFERND--PIVPYSYVPFGGGQHICPGKDYAKLQILLFMHHAVRKFKWEKVNPDEPNDKR 554
            D  ++ ++ I+ NLA  PE  E+ R+E  E+ + + P E +   D+ ++ +    I ESLRL PPA+   R   +D    +G  IPKG     SI  T+ NP  +P PE ++P RF+ ++     P +++PF  G   C G+ +A  ++ + +   + +F   +V PD+   +R
Sbjct:  331 DTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREP-EEIEWDDLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWPDPEVYNPFRFDADNGKGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRF---RVLPDDKEPRR 500          
The following BLAST results are available for this feature:
BLAST of BQ623847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
C7D95_MENSP1.225e-1627.27Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR1.225e-1627.27Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
CP4CA_MOUSE1.601e-1632.08Cytochrome P450 4A12A OS=Mus musculus GN=Cyp4a12a ... [more]
CP3AS_BOVIN1.601e-1631.90Cytochrome P450 3A28 OS=Bos taurus GN=CYP3A28 PE=2... [more]
CP3AJ_CAPAE1.601e-1629.89Cytochrome P450 3A19 (Fragment) OS=Capra aegagrus ... [more]
CP341_MOUSE1.601e-1630.05Cytochrome P450 3A41 OS=Mus musculus GN=Cyp3a41a P... [more]
C340_ORYLA1.601e-1635.29Cytochrome P450 3A40 OS=Oryzias latipes GN=cyp3a40... [more]
ERG5_SCHPO2.090e-1630.22Cytochrome P450 61 OS=Schizosaccharomyces pombe GN... [more]
CP3AT_PIG2.090e-1628.82Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP4F3_RAT2.730e-1630.46Leukotriene-B(4) omega-hydroxylase 2 OS=Rattus nor... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00927 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00927 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623847 ID=BQ623847; Name=BQ623847; organism=Citrus sinensis; type=EST; length=584bp
TTCTTGCAAAGAACTTGGTAGCATTACTCTCAGCAGCCTTTGACAATCCT
AGCGCAACCATTACTTCCATTATGAAAAATCTTGCGGACCTGCCTGAAAT
TTCTGAAAAAGTCCGTAAAGAGCAAATAGAGATAGCAAAGTCGAAAGCAC
CAGGAGAGCCTATGAGTATGAAGGACATAAAAAAGATGACGTACTCAATG
AGTGTGATAAGTGAATCGTTAAGATTAGAACCCCCAGCGTCTGGAACTTT
CAGAGAAGCTATTGAAGACTTCAACTACGAAGGATTTCGGATTCCCAAGG
GATGGAAGGTACACTGGAGTATACATGCAACAAATAGAAACCCTGAATAT
TTTCCAAGCCCGGAAACGTTTGACCCATCAAGATTTGAAAGAAATGATCC
GATTGTTCCTTACTCTTACGTGCCATTTGGAGGAGGACAGCACATATGTC
CTGGAAAAGATTATGCAAAATTACAAATACTCTTATTCATGCATCATGCA
GTGAGAAAATTCAAGTGGGAGAAAGTGAACCCAGATGAGCCAAATGATAA
GAGATCCAGACTTGTCTCCTGCCCAGGGGACTCC
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