BQ623849
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_CHICK (60S ribosomal protein L13 OS=Gallus gallus GN=RPL13 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.548e-46 Identity = 96/189 (50.79%), Postives = 125/189 (66.14%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI--TLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N +I HF K WQ V TWFNQP I PRP AGP+RP+V T++Y+ K+RAGRGF+LEELK AGI K+ A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+PEEL ATQ+ GP MPI ++ ++ +++ K+FKA+ LR+ RAN R F Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPVAGPIRPIVRCPTVRYHKKVRAGRGFSLEELKLAGINKRFARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSPEELKMATQLSGPVMPIRNVFKREKARVI--SEEEKNFKAFASLRMARANARLF 192
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_RAT (60S ribosomal protein L13 OS=Rattus norvegicus GN=Rpl13 PE=1 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 2.196e-45 Identity = 95/187 (50.80%), Postives = 121/187 (64.71%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N +I HF K WQ V TWFNQP I PRP +GP+RP+V T++Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI T++ K+FKA+ LR+ RAN R F Sbjct: 6 NGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKMARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARAITEEEKNFKAFASLRMARANARLF 192
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_MOUSE (60S ribosomal protein L13 OS=Mus musculus GN=Rpl13 PE=2 SV=3) HSP 1 Score: 182.185 bits (461), Expect = 2.196e-45 Identity = 96/189 (50.79%), Postives = 125/189 (66.14%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI--TLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N +I HF K WQ V TWFNQP I PRP +GP+RP+V T++Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI +K ++ T++ K+FKA+ LR+ RAN R F Sbjct: 6 NGMILKPHFHKDWQQRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARVI--TEEEKNFKAFASLRMARANARLF 192
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_HUMAN (60S ribosomal protein L13 OS=Homo sapiens GN=RPL13 PE=1 SV=4) HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45 Identity = 94/189 (49.74%), Postives = 125/189 (66.14%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI--TLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N ++ HF K WQ V TWFNQP I PRP +GP+RP+V T++Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MP+ +K ++ T++ K+FKA+ LR+ RAN R F Sbjct: 6 NGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVI--TEEEKNFKAFASLRMARANARLF 192
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_BOVIN (60S ribosomal protein L13 OS=Bos taurus GN=RPL13 PE=2 SV=3) HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45 Identity = 97/189 (51.32%), Postives = 124/189 (65.61%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI--TLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N +I HF K WQ V TWFNQP I PRP +GPLRPVV T++Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+ E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI +K ++ T++ K+FKA+ LR+ RAN R F Sbjct: 6 NGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPLRPVVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARVI--TEEEKNFKAFASLRMARANARLF 192
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_SPOFR (60S ribosomal protein L13 OS=Spodoptera frugiperda GN=RpL13 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.389e-45 Identity = 92/184 (50.00%), Postives = 120/184 (65.22%), Query Frame = 2 Query: 41 KHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLRIERA 592 K NN+IPNGHF K WQ +VKTWFNQP + PRP AGPLRPVV T++Y+ K+RAGRGFTL E++AAG+ A TIGI+VD RR+N+S+E LQ NVQRLK Y+A+L++FP + +K G++ EE ATQ++GP MP+ P T++ K FKAY LR R+ Sbjct: 3 KGNNMIPNGHFHKDWQRFVKTWFNQPARRHRRKQNRIKKAKAVAPRPAAGPLRPVVRCPTIRYHTKVRAGRGFTLREIRAAGLNPAFARTIGIAVDPRRRNKSVESLQVNVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSIARAITEEEKDFKAYQYLRGARS 185
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_CRIGR (60S ribosomal protein L13 OS=Cricetulus griseus GN=RPL13 PE=2 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 2.428e-44 Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPI--TLEKPTVDLVKGTQDMKSFKAYDKLRIERANERHF 607 N +I HF K WQ V TWFNQP I PRP +GP+RP+V T++Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP M I +K ++ T++ K+FKA+ LR+ RAN R F Sbjct: 6 NGMILKPHFHKDWQRRVDTWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMRIRNVYKKEKARVI--TEEEKNFKAFASLRMARANARLF 192
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_SCHMA (60S ribosomal protein L13 OS=Schistosoma mansoni GN=RPL13 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.513e-41 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 2 Query: 47 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKGTQDMKSFKAYDKLR 580 N+V+ + HF+K WQ VKTWFNQP I PRP +GPLRP+V+ T +YNMK+R+GRGF+L+E++AAG+ K A TIGI+VDHRR+N S+EGLQ NV RLK YKAKL++FP K +A D+ +E+ ATQ++ P +PIT + K T + A+ +R Sbjct: 5 NDVLHHNHFRKKWQFMVKTWFNQPARKERRRQARKAKAQRIAPRPASGPLRPIVNCPTFRYNMKVRSGRGFSLQEVRAAGLNPKFARTIGIAVDHRRRNVSVEGLQRNVARLKAYKAKLILFPLNPAKPQAMDAKADEVKKATQLRRPVLPITQRAKRLKAHKPTSSELRYSAFHAIR 182
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_SCHPO (60S ribosomal protein L13 OS=Schizosaccharomyces pombe GN=rpl13 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.738e-40 Identity = 92/184 (50.00%), Postives = 115/184 (62.50%), Query Frame = 2 Query: 56 IPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKG-TQDMKSFKAYDKLRIERANERH 604 +PN HF K WQ YVKTWFNQP I PRP +RP V T++YNMK+RAGRGFTLEELKAAG+ +++A TIGI VDHRR+NRS E LQ NV+R+K Y A L+VFPR+A + K GD+ A T V +PIT E V+ K T++ K+F A+ L ERA R+ Sbjct: 9 LPNAHFHKDWQRYVKTWFNQPGRKLRRRQARQTKAAKIAPRPVEA-IRPAVKPPTIRYNMKVRAGRGFTLEELKAAGVSRRVASTIGIPVDHRRRNRSEESLQRNVERIKVYLAHLIVFPRKAGQPKKGDATDVSGAEQTDV-AAVLPITQE--AVEEAKPITEEAKNFNAFSTLSNERAYARY 188
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Match: RL13_DICDI (60S ribosomal protein L13 OS=Dictyostelium discoideum GN=rpl13 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.352e-39 Identity = 86/181 (47.51%), Postives = 112/181 (61.88%), Query Frame = 2 Query: 44 HNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLV--KGTQDMKSFKAYDKLR 580 HN V+ N HF+KHWQ V+TWFNQP +FPRP A L+PVV G T++YNMK+RAGRGFTLEELKAAG+ + A TIGI+VD RR N++ + L N QRLK Y++KLV+FPR+ K G++ EE+A A Q P+ + T + K T+ K F AY L+ Sbjct: 4 HNKVLSNDHFRKHWQMRVRTWFNQPARKIRRRNNRIEKAAKVFPRPIA-TLKPVVRGSTIRYNMKVRAGRGFTLEELKAAGLTAQYARTIGIAVDTRRVNKTQQSLTLNTQRLKNYQSKLVLFPRKVNAPKKGEATKEEVAKAVQTLKPFTVKSAIAVTCEQTPRKPTEAEKKFSAYATLK 183 The following BLAST results are available for this feature:
BLAST of BQ623849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623849 ID=BQ623849; Name=BQ623849; organism=Citrus sinensis; type=EST; length=678bpback to top |