BQ623864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.827e-16 Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 1 Query: 4 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAYVLHVWFLRSGHCHRQGTVRELGRPLGRPCQQQCLGLRHQLCPR 264 GGP GE DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLA + F +G + L L P + + P+ Sbjct: 187 GGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTPQ 273
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 9.939e-16 Identity = 44/86 (51.16%), Postives = 48/86 (55.81%), Query Frame = 1 Query: 4 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAYVLHVWFLRSGHCHRQGTVRELGRPLGRPCQQQCLGLRHQLCP 261 GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLA F +G V+ L L P + P Sbjct: 166 GGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.053e-15 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 2 Query: 134 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 232 M ++ G+F+QA+VTG GP +NL DHLADPVNNN Sbjct: 233 MLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265 HSP 2 Score: 49.6766 bits (117), Expect = 1.053e-15 Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 1 Query: 13 LGEVTDPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLA 132 LG DP YPGG F+PLG D ++ ELK+KEIKNGRLA Sbjct: 192 LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLA 232
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.214e-15 Identity = 42/72 (58.33%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 4 GGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAYVLHVWFLRSGHCHRQGTVRELGRPLGRP 219 GGP GE DPLYPG SFDPLGLADDP+ FAELKVKEIKNGRLA F +G ++ L L P Sbjct: 169 GGPAGEGLDPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADP 240 HSP 2 Score: 73.559 bits (179), Expect = 3.549e-13 Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 2 Query: 134 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 262 MFS FGFFVQAIVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 212 MFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.176e-14 Identity = 43/71 (60.56%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAYVLHVWFLRSGHCHRQGTVRELGRPLG 213 A GPLGEVTDPLYPG SFD LGLA+D EAFAELKVKE+KNGRLA F R+ + L LG Sbjct: 181 ARGPLGEVTDPLYPG-SFDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLG 250 HSP 2 Score: 65.855 bits (159), Expect = 7.400e-11 Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 134 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 265 MFSMFGFFVQAIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 224 MFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.989e-13 Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 37 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAYVLHVWF 153 YPGG+FDPLG + DP F ELK+KEIKNGRLA + V F Sbjct: 167 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGF 205 HSP 2 Score: 38.891 bits (89), Expect = 1.989e-13 Identity = 20/34 (58.82%), Postives = 23/34 (67.65%), Query Frame = 2 Query: 134 MFSMFGFFVQ-AIVTGKGPLENLADHLADPVNNN 232 M + GF VQ + G GPLENLA HLADP +NN Sbjct: 199 MLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 3.356e-13 Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 37 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAYVLHVWF 153 YPGG+FDPLG + DP F ELKVKEIKNGRLA + V F Sbjct: 168 YPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGF 206 HSP 2 Score: 38.1206 bits (87), Expect = 3.356e-13 Identity = 19/34 (55.88%), Postives = 24/34 (70.59%), Query Frame = 2 Query: 134 MFSMFGFFVQ-AIVTGKGPLENLADHLADPVNNN 232 + ++ GF VQ + G GPLENLA HLADP +NN Sbjct: 200 LLAIVGFCVQQSAYLGTGPLENLATHLADPWHNN 233
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.105e-12 Identity = 37/64 (57.81%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 28 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAYVLHVWFLRSGHCHRQGTVRELGRPLGRP 219 D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLA + F +G V+ L L P Sbjct: 174 DTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADP 237 HSP 2 Score: 69.3218 bits (168), Expect = 6.693e-12 Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 134 MFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 265 MFS GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 209 MFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252 The following BLAST results are available for this feature:
BLAST of BQ623864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623864 ID=BQ623864; Name=BQ623864; organism=Citrus sinensis; type=EST; length=399bpback to top |