BQ623867

Overview
NameBQ623867
Unique NameBQ623867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A2_OSCTI (Elongation factor 1-alpha 2 OS=Oscheius tipulae GN=eft-2 PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 6.371e-92
Identity = 164/226 (72.57%), Postives = 189/226 (83.63%), Query Frame = 2
Query:    2 LDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            + WYKG             TLLEALD I  P+RPTD+PLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P  +TTEVKSVEMHHESL EA PGDNVGFNVKNVSVKD++RG V S+SK+DPAK + +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KFAE+  K+DRR+GK++E  PKFLK+GDAG V++IPTKP+ VE F++Y PLGRFAVRDMRQTV
Sbjct:  208 MSWYKGWSVERKEGNASGKTLLEALDCIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAQPGDNVGFNVKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDPPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 8.321e-92
Identity = 160/210 (76.19%), Postives = 186/210 (88.57%), Query Frame = 2
Query:   14 KGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            KG TLL+A+D I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++K GMVVTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNVSVKD++RG VAS+SK+DPAK A++F +QVI++NHPGQIG GYAPVLDCHT+HIA KFAE+L KIDRR+GK LE  PKF+K+GDA  VK++P+KPM VE+++EYPPLGRFAVRDMRQTV
Sbjct:  222 KGKTLLDAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPSNVTTEVKSVEMHHEQLAEGKPGDNVGFNVKNVSVKDIRRGNVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKSLEASPKFVKSGDACIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTV 431          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_CHICK (Elongation factor 1-alpha 1 OS=Gallus gallus GN=EEF1A PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 8.321e-92
Identity = 167/209 (79.90%), Postives = 182/209 (87.08%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TLLEALD I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG VA +SK+DP   A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V MIP KPM VE+FS+YPPLGRFAVRDMRQTV
Sbjct:  225 GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 8.321e-92
Identity = 159/209 (76.08%), Postives = 184/209 (88.04%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TLLEA+D ++ P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF P+G+TTEVKSVEMHHE L E LPGDNVGFNVKNVSVK+++RG VA +SK+DP KG  +FT+QVII NHPGQI  GY+PVLDCHT+HIA +F E++ KIDRRSGK++E  PKF+K GDA  V+MIP+KPM VETF+EYPPLGRFAVRDMRQTV
Sbjct:  223 GKTLLEAIDAVDPPTRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLPEGLPGDNVGFNVKNVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTV 431          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.087e-91
Identity = 158/210 (75.24%), Postives = 184/210 (87.62%), Query Frame = 2
Query:   14 KGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            KG TLLEA+D I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+G+TTEVKSVEMHHESL   LPGDNVGFNVKNVSVKD++RG V  +SK+DP  G ++FT+QVII+NHPGQI  GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA   KM+P+KPM VE F++Y PLGRFAVRDMRQTV
Sbjct:  222 KGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTV 431          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 335.88 bits (860), Expect = 1.087e-91
Identity = 158/210 (75.24%), Postives = 184/210 (87.62%), Query Frame = 2
Query:   14 KGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            KG TLLEA+D I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+G+TTEVKSVEMHHESL   LPGDNVGFNVKNVSVKD++RG V  +SK+DP  G ++FT+QVII+NHPGQI  GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA   KM+P+KPM VE F++Y PLGRFAVRDMRQTV
Sbjct:  222 KGKTLLEAIDSIEPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMIVTFAPAGVTTEVKSVEMHHESLDAGLPGDNVGFNVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTV 431          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A1_RAT (Elongation factor 1-alpha 1 OS=Rattus norvegicus GN=Eef1a1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.087e-91
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TLLEALD I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG VA +SK+DP   A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTV
Sbjct:  225 GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A1_RABIT (Elongation factor 1-alpha 1 OS=Oryctolagus cuniculus GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.087e-91
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TLLEALD I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG VA +SK+DP   A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTV
Sbjct:  225 GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A1_PONAB (Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF1A1 PE=2 SV=2)

HSP 1 Score: 335.88 bits (860), Expect = 1.087e-91
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TLLEALD I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG VA +SK+DP   A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTV
Sbjct:  225 GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A1_PANTR (Elongation factor 1-alpha 1 OS=Pan troglodytes GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.087e-91
Identity = 166/209 (79.43%), Postives = 182/209 (87.08%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TLLEALD I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTF P  +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG VA +SK+DP   A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTV
Sbjct:  225 GTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTV 433          
The following BLAST results are available for this feature:
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A2_OSCTI6.371e-9272.57Elongation factor 1-alpha 2 OS=Oscheius tipulae GN... [more]
EF1A_SCHCO8.321e-9276.19Elongation factor 1-alpha OS=Schizophyllum commune... [more]
EF1A_CHICK8.321e-9279.90Elongation factor 1-alpha 1 OS=Gallus gallus GN=EE... [more]
EF1A_ARXAD8.321e-9276.08Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]
EF1A2_SCHPO1.087e-9175.24Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A1_SCHPO1.087e-9175.24Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A1_RAT1.087e-9179.43Elongation factor 1-alpha 1 OS=Rattus norvegicus G... [more]
EF1A1_RABIT1.087e-9179.43Elongation factor 1-alpha 1 OS=Oryctolagus cunicul... [more]
EF1A1_PONAB1.087e-9179.43Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF... [more]
EF1A1_PANTR1.087e-9179.43Elongation factor 1-alpha 1 OS=Pan troglodytes GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00947 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00947 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623867 ID=BQ623867; Name=BQ623867; organism=Citrus sinensis; type=EST; length=644bp
CCTTGACTGGTACAAGGGCCCAACCCTTCTTGAAGCTCTTGACCAGATCA
ATGAACCCAAGAGACCAACAGACAAGCCTCTCCGTCTCCCCCTTCAGGAT
GTCTACAAGATTGGTGGTATTGGAACTGTCCCTGTTGGCCGTGTTGAAAC
TGGTGTACTCAAGCCCGGTATGGTAGTCACATTCGGTCCGTCTGGATTGA
CTACGGAAGTTAAGTCGGTTGAGATGCACCATGAGTCTCTCCAGGAGGCA
CTTCCTGGTGATAATGTGGGGTTCAACGTTAAGAATGTTTCAGTGAAGGA
TCTTAAGCGTGGTTACGTTGCATCTAACTCCAAGGACGATCCCGCCAAGG
GGGCATCCAACTTCACCTCCCAAGTTATCATCATGAACCACCCTGGCCAG
ATTGGAAACGGTTATGCACCTGTTCTTGATTGCCACACTTCCCACATAGC
TGTCAAGTTTGCTGAAATCTTGACCAAGATTGACAGGCGATCTGGTAAGG
AGCTGGAGAAGGAGCCCAAATTCTTAAAGAATGGTGATGCTGGGTTTGTT
AAGATGATTCCCACCAAGCCTATGGTTGTGGAAACTTTCTCCGAATATCC
CCCACTTGGTCGTTTTGCTGTGAGAGACATGCGCCAGACCGTCG
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