BQ623867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU_DESVV (Elongation factor Tu OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 65/212 (30.66%), Postives = 98/212 (46.23%), Query Frame = 2 Query: 26 LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLG-RFAVRDMRQTV 643 LL A D I EP+R DKP +P++DV+ I G GTV GRVE GV+K G V G+ KS VEM + L + GDN+G ++ V D++RG V + K F ++V +++ + G + P + + +I I G E+ + GD + P+ +E LG RFA+R+ +TV Sbjct: 195 LLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEI--VGIKDTTKSTCTGVEMFRKLLDQGQAGDNIGALLRGVKRDDVERGQVLAAPKS--ITPHRKFKAEVYVLSK--EEGGRHTPFFSGYRPQFYFRTTDITGVITLEEGVEM------VMPGDNATFNVELIAPIAME-------LGLRFAIREGGRTV 387
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU_DESVH (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 65/212 (30.66%), Postives = 98/212 (46.23%), Query Frame = 2 Query: 26 LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLG-RFAVRDMRQTV 643 LL A D I EP+R DKP +P++DV+ I G GTV GRVE GV+K G V G+ KS VEM + L + GDN+G ++ V D++RG V + K F ++V +++ + G + P + + +I I G E+ + GD + P+ +E LG RFA+R+ +TV Sbjct: 195 LLAACDSYIPEPQRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEI--VGIKDTTKSTCTGVEMFRKLLDQGQAGDNIGALLRGVKRDDVERGQVLAAPKS--ITPHRKFKAEVYVLSK--EEGGRHTPFFSGYRPQFYFRTTDITGVITLEEGVEM------VMPGDNATFNVELIAPIAME-------LGLRFAIREGGRTV 387
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU_DEIRA (Elongation factor Tu OS=Deinococcus radiodurans GN=tufA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 68/217 (31.34%), Postives = 101/217 (46.54%), Query Frame = 2 Query: 26 LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT----TEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMN------HPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643 LL+A+D I P+R TDK +P++DV+ I G GTV GRVE G +K V GLT T V +EMH + L + GDNVG ++ V+ D++RG V +K K + F + V +++ H G GY P T+ D EL++ + + GD + KP+ +E RFA+R+ +TV Sbjct: 203 LLDAVDSYIPTPERDTDKTFLMPVEDVFTITGRGTVATGRVERGTVKVQDEVEI--VGLTDTRKTTVTGIEMHRKLLDSGMAGDNVGVLLRGVARDDVERGQVL--AKPGSIKPHTKFEASVYVLSKDEGGRHSAFFG-GYRPQFYFRTT-------------DVTGVVELQEGVEMVMPGDNVTFTVELIKPIAMEEGL------RFAIREGGRTV 395
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBM (Elongation factor Tu OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 50/166 (30.12%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 26 LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV-----KSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEL 505 L+EA+D I P+R TD+P +P++DV+ I G GTV GRVE GVL G V G+ E+ +EM + L EA+ GDN+G ++ + +++RG V +K F QV ++ + G + P + + + ++ I+ G E+ Sbjct: 194 LMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTGDEVEL--IGMKEEITKTVCTGIEMFRKILDEAMAGDNIGALLRGIQRDEIQRGQVL--AKPGSITPHKKFVGQVYVLKK--EEGGRHTPFFNGYRPQFYFRTTDVTGSINLPEGVEM 353
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU_CARRP (Elongation factor Tu OS=Carsonella ruddii (strain PV) GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 45/125 (36.00%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 26 LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMN 388 LLE LD+ I P R DKP +P++DV+ I G GTV G++E G++K G +V F + + T V +EM ++L E G+NVG ++++ ++++RG V K K +NF +V I++ Sbjct: 195 LLEILDKNIPVPNRIIDKPFLMPIEDVFSISGRGTVVTGKIERGIIKTGEEIEIVGFKET-IKTIVIGIEMFKKTLDEGFAGENVGILLRSIKREEVERGQVL--IKSGTIKPHTNFICEVYILS 316
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU_BRELN (Elongation factor Tu OS=Brevibacterium linens GN=tuf PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 2 Query: 41 DQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMN 388 D + EP+R DKP +P++DV+ I G GTV GRVE GVL P +V T V ++EM ++L +A G+NVG ++ +D++RG V K + F +QV I++ Sbjct: 200 DNVPEPERDVDKPFLMPVEDVFTITGRGTVVTGRVERGVLLPNDEIEIVGIKEKSSKTTVTAIEMFRKTLPDARAGENVGLLLRGTKREDVERGQVI--VKPGSITPHTKFEAQVYILS 316
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 26 LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEL 505 L+EA+D I P+R TDKP +P++DV+ I G GTV GRVE G++K G V T T V VEM + L E GDN+G ++ + ++++RG V +K + F ++V ++ + G + P + + + ++ + G E+ Sbjct: 194 LMEAVDAYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEVVGLKATAKTVVTGVEMFRKLLDEGRAGDNIGALLRGLKREEVERGQVL--AKPGSITPHTKFKAEVYVLTK--EEGGRHTPFFNGYRPQFYFRTTDVTGSVQLPQGVEM 352
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU2_SHISS (Elongation factor Tu 2 OS=Shigella sonnei (strain Ss046) GN=tuf2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 62/205 (30.24%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 47 INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPT--KPMVVETFSEYPPLGRFAVRDMRQTV 643 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K K + F S+V I++ G + P + + ++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDN--IKMVVTLIHPIAMDDGL------RFAIREGGRTV 384
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU2_SHIF8 (Elongation factor Tu 2 OS=Shigella flexneri serotype 5b (strain 8401) GN=tuf2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 62/205 (30.24%), Postives = 99/205 (48.29%), Query Frame = 2 Query: 47 INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPT--KPMVVETFSEYPPLGRFAVRDMRQTV 643 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K K + F S+V I++ G + P + + ++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDN--IKMVVTLIHPIAMDDGL------RFAIREGGRTV 384
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EFTU2_SHESR (Elongation factor Tu 2 OS=Shewanella sp. (strain MR-7) GN=tuf2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12 Identity = 51/163 (31.29%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 26 LLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKEL 505 L EALD I EP+R DKP +P++DV+ I G GTV GRVE G+++ G V TT+ VEM + L E G+N G ++ D++RG V SK + F S+V +++ + G + P + + ++ I+ G E+ Sbjct: 192 LAEALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRTTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVL--SKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350 The following BLAST results are available for this feature:
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623867 ID=BQ623867; Name=BQ623867; organism=Citrus sinensis; type=EST; length=644bpback to top |