BQ623867

Overview
NameBQ623867
Unique NameBQ623867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 7.788e-90
Identity = 160/209 (76.56%), Postives = 181/209 (86.60%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G +LLEALD I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+L+PGMVVTF P  +TTEVKSVEMHHE+L EALPGDNVGFNVKNVSVKD++RG V  +SK DP + A+ FTSQVII+NHPGQI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTV
Sbjct:  225 GVSLLEALDTILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 7.788e-90
Identity = 155/209 (74.16%), Postives = 184/209 (88.04%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TLLEA+D I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +K GMVV F P+ +TTEVKSVEMHHE+L E LPGDNVGFNVKNVSVKD++RG V S+SK+DPAK +++FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+E++ KIDRRSGK++E  PKF+K+GD+  VKM+P+KPM VE +++YPPLGRFAVRDMRQTV
Sbjct:  223 GKTLLEAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKAGMVVNFAPAAVTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTV 431          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_APIME (Elongation factor 1-alpha OS=Apis mellifera PE=3 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.017e-89
Identity = 157/209 (75.12%), Postives = 180/209 (86.12%), Query Frame = 2
Query:   17 GPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            G TL+EALD I  P RPTDK LRLPLQDVYKIGGIGTVPVGRVETG+LKPGM+VTF P+ LTTEVKSVEMHHE+L EALPGDNVGFNVKN+SVK+L+RGYVA +SK+ P +GA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K DRR+GK  E+ PK +K+GDA  V + PTKPM VE F E+PPLGRFAVRDMRQTV
Sbjct:  225 GKTLIEALDAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2)

HSP 1 Score: 328.176 bits (840), Expect = 2.266e-89
Identity = 157/217 (72.35%), Postives = 184/217 (84.79%), Query Frame = 2
Query:    2 LDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKE---PKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            ++WYKGPTLLEALD I EPKRP DKPLR+PLQDVYKIGGIGTVPVGRVETG++KPGMVVTF P+GL+TEVKSVEMHHE L EA PGDNVGFNVKNVSVK++KRG VA +SK+DP +    F +QVI++NHPGQI  GY+PVLDCHT+HIA KF EI+ K+DRR+G  + KE      LKNGDA  V++ P++PM VE+F+EYPPLGRFAVRDMRQTV
Sbjct:  208 MEWYKGPTLLEALDAIVEPKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTEVKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLNHPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYPPLGRFAVRDMRQTV 424          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 3.865e-89
Identity = 156/210 (74.29%), Postives = 179/210 (85.24%), Query Frame = 2
Query:   14 KGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            KG TLLEA+D I  P RPTDK LRLPLQDVYKIGGIGTVPVGRVETGV+KPGMVVTF PSG+TTEVKSVEMHHE L+E +PGDNVGFNVKNVSVK+++RG V  +SK+DP K A +F + VI++NHPGQI  GY+PVLDCHT+HIA KF E+L K DRR+GK+LE  PKFLK GDA  VK +P+KPM VE F++YPPLGRFAVRDMRQTV
Sbjct:  222 KGKTLLEAIDAIEPPVRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPSGVTTEVKSVEMHHEQLEEGVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKAAESFNATVIVLNHPGQISAGYSPVLDCHTAHIACKFDELLEKNDRRTGKKLEDSPKFLKAGDAAMVKFVPSKPMCVEAFTDYPPLGRFAVRDMRQTV 431          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 5.048e-89
Identity = 159/211 (75.36%), Postives = 184/211 (87.20%), Query Frame = 2
Query:   11 YKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            + G TLLEALD I  P RP+ KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVVTF P+ L+TEVKSVEMHHESL EALPGDNVGFNVKNVS+KD++RG VAS+SK+DPA  A++F +QVII+NHPG+I  GY PVLDCHT+HIA KFAE+L KIDRRSGK +E EPK +K+GDA  + +IP+K M VE+FS+YPPLGRFAVRDMRQTV
Sbjct:  225 HTGKTLLEALDNIPLPARPSSKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVTFCPANLSTEVKSVEMHHESLPEALPGDNVGFNVKNVSIKDIRRGMVASDSKNDPAIEAASFKAQVIILNHPGEIHAGYQPVLDCHTAHIACKFAELLEKIDRRSGKVIETEPKMVKSGDAAIINLIPSKGMCVESFSQYPPLGRFAVRDMRQTV 435          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2)

HSP 1 Score: 326.635 bits (836), Expect = 6.593e-89
Identity = 159/226 (70.35%), Postives = 184/226 (81.42%), Query Frame = 2
Query:    5 DWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEA-LPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            DWYKG             TLLEA+D I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGV+K GMVVTF P+ +TTEVKSVEMHHE L +   PGDNVGFNVKNVSVKD++RG VA +SK+DP KG  +F +QVI++NHPGQIG GYAPVLDCHT+HIA KF  ++ KIDRR+GK++E  PKF+K+GDA  VKM+P+KPM VE F+EYPPLGRFAVRDMRQTV
Sbjct:  207 DWYKGWTKETKAGEVKGKTLLEAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVTFAPANVTTEVKSVEMHHEILPDGGFPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFDTLIEKIDRRTGKKMEDSPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTV 432          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 324.324 bits (830), Expect = 3.272e-88
Identity = 152/210 (72.38%), Postives = 182/210 (86.67%), Query Frame = 2
Query:   14 KGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            +G  L++ALD I  P+RPTDKPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P  L TEVKSVEMHHE+L EA+PGDNVGFNVKNVSVK+L+RGYVA +SK++P +GA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K DRR+GK  E EPK +K+GDA  + ++P+KP+ VE+F E+PPLGRFAVRDMRQTV
Sbjct:  224 EGKCLIDALDAILPPQRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTV 433          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 7.290e-88
Identity = 147/215 (68.37%), Postives = 185/215 (86.05%), Query Frame = 2
Query:    2 LDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELE-KEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            + WYKGPTL+ ALD +  P+RP DKPLRLPLQDVYKI GIGTVPVGRVETG+LKPG +V F PSG+++E KS+EMHH +L +A+PGDNVGFNV+N++VKD+KRG VAS++K+ PA G  +FT+QVI+MNHPGQI  GY PVLDCHTSHIA KF E+L+KIDRR+GK +E  EP+++KNGD+  VK++PTKP+ VE F+++PPLGRFAVRDM+QTV
Sbjct:  206 MPWYKGPTLIGALDSVTPPERPVDKPLRLPLQDVYKISGIGTVPVGRVETGILKPGTIVQFAPSGVSSECKSIEMHHTALAQAIPGDNVGFNVRNLTVKDIKRGNVASDAKNQPAVGCEDFTAQVIVMNHPGQIRKGYTPVLDCHTSHIACKFEELLSKIDRRTGKSMEGGEPEYIKNGDSALVKIVPTKPLCVEEFAKFPPLGRFAVRDMKQTV 420          
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 1.243e-87
Identity = 151/210 (71.90%), Postives = 179/210 (85.24%), Query Frame = 2
Query:   14 KGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLQEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTV 643
            KG TLLEA+D I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+K GMVV F P+ +TTEVKSVEMHHE + E LPGDNVGFNVKNVS+KD++RG V  +SK+DP   A++F +QVI++NHPGQIG GY PVLDCHT+HIA KFAE++ KIDRR+GK +E  PKF+K+GDA  VK++  KP+ VET+++YPPLGRFAVRDMRQTV
Sbjct:  222 KGKTLLEAIDAIEPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVKFAPTNVTTEVKSVEMHHEQIPEGLPGDNVGFNVKNVSIKDIRRGNVCGDSKNDPPMEAASFNAQVIVLNHPGQIGAGYTPVLDCHTAHIACKFAELIEKIDRRTGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLGRFAVRDMRQTV 431          
The following BLAST results are available for this feature:
BLAST of BQ623867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A2_MOUSE7.788e-9076.56Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef... [more]
EF1A1_RHIRA7.788e-9074.16Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_APIME1.017e-8975.12Elongation factor 1-alpha OS=Apis mellifera PE=3 S... [more]
EF1A_DICDI2.266e-8972.35Elongation factor 1-alpha OS=Dictyostelium discoid... [more]
EF1A_ASHGO3.865e-8974.29Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]
EF1A_HYDAT5.048e-8975.36Elongation factor 1-alpha OS=Hydra attenuata PE=2 ... [more]
EF1A_YARLI6.593e-8970.35Elongation factor 1-alpha OS=Yarrowia lipolytica G... [more]
EF1A2_DROME3.272e-8872.38Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]
EF1A_ENTHI7.290e-8868.37Elongation factor 1-alpha OS=Entamoeba histolytica... [more]
EF1A_CRYNE1.243e-8771.90Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00947 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00947 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623867 ID=BQ623867; Name=BQ623867; organism=Citrus sinensis; type=EST; length=644bp
CCTTGACTGGTACAAGGGCCCAACCCTTCTTGAAGCTCTTGACCAGATCA
ATGAACCCAAGAGACCAACAGACAAGCCTCTCCGTCTCCCCCTTCAGGAT
GTCTACAAGATTGGTGGTATTGGAACTGTCCCTGTTGGCCGTGTTGAAAC
TGGTGTACTCAAGCCCGGTATGGTAGTCACATTCGGTCCGTCTGGATTGA
CTACGGAAGTTAAGTCGGTTGAGATGCACCATGAGTCTCTCCAGGAGGCA
CTTCCTGGTGATAATGTGGGGTTCAACGTTAAGAATGTTTCAGTGAAGGA
TCTTAAGCGTGGTTACGTTGCATCTAACTCCAAGGACGATCCCGCCAAGG
GGGCATCCAACTTCACCTCCCAAGTTATCATCATGAACCACCCTGGCCAG
ATTGGAAACGGTTATGCACCTGTTCTTGATTGCCACACTTCCCACATAGC
TGTCAAGTTTGCTGAAATCTTGACCAAGATTGACAGGCGATCTGGTAAGG
AGCTGGAGAAGGAGCCCAAATTCTTAAAGAATGGTGATGCTGGGTTTGTT
AAGATGATTCCCACCAAGCCTATGGTTGTGGAAACTTTCTCCGAATATCC
CCCACTTGGTCGTTTTGCTGTGAGAGACATGCGCCAGACCGTCG
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