BQ623877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SIAH2_HUMAN (E3 ubiquitin-protein ligase SIAH2 OS=Homo sapiens GN=SIAH2 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.008e-32 Identity = 78/214 (36.45%), Postives = 121/214 (56.54%), Query Frame = 2 Query: 32 LLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELG-NIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDHK-VDMHNGSTFNHRYVKQN-PHEVENATWMLTVFSCFGQYFCLHFEAFQLGMA-PVYMAFLRFMGDDNESKNYSYSLEVGGNGRKMSWQGVPRSIRD 661 L ECPVC + + PPI QC GH +C+ C+ ++ + CPTCR L +IR LA+EKVA+++ PCKY + GC + K +HE C +RPY+CP G+ C G + +++HL HK + G N P V+ W++ + SCFG +F L E + + A + +G +++N++Y LE+ GN R+++W+ PRSI D Sbjct: 77 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKL-SCCPTCRGALTPSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQGEDIVFLATDINLPGAVD---WVM-MQSCFGHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHD 285
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SIAH2_XENLA (E3 ubiquitin-protein ligase siah2 OS=Xenopus laevis GN=siah2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.317e-32 Identity = 78/214 (36.45%), Postives = 118/214 (55.14%), Query Frame = 2 Query: 32 LLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELG-NIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDHK-VDMHNGSTFNHRYVKQN-PHEVENATWMLTVFSCFGQYFCLHFEAFQLGMA-PVYMAFLRFMGDDNESKNYSYSLEVGGNGRKMSWQGVPRSIRD 661 L ECPVC + + PPI QC GH +C+ C+ ++ + CPTCR L +IR LA+EKVA+++ PCKY S GC + K +HE C +RPY+CP G+ C G + ++ HL HK + G N P V+ W++ + CF +F L E + + A + +G +++NY+Y LE+ GN R+++W+ PRSI D Sbjct: 66 LFECPVCFDYVLPPILQCQAGHLVCNQCRQKL-SCCPTCRASLTPSIRNLAMEKVASAVLFPCKYASTGCSLSLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHSHKSITTLQGEDIVFLATDINLPGAVD---WVMMQY-CFNHHFMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENYAYRLELNGNRRRLTWEATPRSIHD 274
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.752e-22 Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 29 ELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDH 379 ++L+CP+C A+ P+ QC NGH CS C P++ N+CP C +G+IRC A+E+V S+ +PC+Y GC Y + HE C F P +CP G C G L H H Sbjct: 41 DILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQG--CNYTGSYKDLYEHYDLTH 155
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.784e-21 Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 2 Query: 5 LTVSSSVRELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDHKVDM 391 L+V+ ++L+CP+C + PI QC NGH C+ C +V NRCP+C +G +RC A+EKV + + C YGC Y ++ HE C+F P +CP +C G L H++ +HK D+ Sbjct: 101 LSVTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPIL--DCHYTGYYKDLNNHVRAEHKDDL 227
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.330e-21 Identity = 66/225 (29.33%), Postives = 106/225 (47.11%), Query Frame = 2 Query: 29 ELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDHKVDMHNGSTFNHRYVKQNPHEVE-NATWMLTVFSCFGQYFCLHFEAFQLGMAP--VYMAFLRFMGDDNESKNYSYSLEVGGNGRKMSWQG--VPRSIRDSHKKVRDSF 688 E+L+CP+C A PI QC NGH CS C P+++N+CP C +G+ RC A+E V S+ +PC GC Y +L HE +C+F CP +C L H + H ++++ +TF + P V N + + + + ++ H A Q P VY+ E YSY+L +G + +Q V R ++ S + +++F Sbjct: 47 EILDCPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMFSHCACP--ALDCNYTSSYKDLYTHYRITH-MEINQINTF----ICDIPLSVRMNISKKILIRT---EHLTNHLFAVQCFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSFQTPQENF 261
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SINL9_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana GN=At5g37910 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 45/121 (37.19%), Postives = 65/121 (53.72%), Query Frame = 2 Query: 29 ELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDHKVDM 391 ++L+CP+C A+ PI QC NGH C C P++ N+CP C +G+ R A+E V S+ +PC +GC + Y + HE +CIF +CP S C G L AH K H ++ Sbjct: 34 DILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNKCPACTLPVGHSRSRAMESVLESILIPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCP--SSVCDYTGSYKDLYAHYKLTHSTNI 152
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SIL11_ARATH (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 63/235 (26.81%), Postives = 102/235 (43.40%), Query Frame = 2 Query: 29 ELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPT--CRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDHKVDMHNGSTFNHRY------VKQNPHEVENATW-----MLTVFSCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDDNESKNYSYSLEVGGNGRKMSWQG--VPRSIRDSHKKVRDSF 688 ++L+CPVC + P QC +GH +C+ C +V N+CP C +GN RC A+E+V S +PC+ +GC Y HE +C + +CP EC G + H H ++N + + ++ V N E + W +L V CF + VY+ R +E K +SY L +G ++++ V R + + + DSF Sbjct: 39 DVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCP--NLECNYTGSYNIIYGHFMRRH---LYNSTIVSSKWGYSTVDVLINIKEKVSVLWESRQKLLFVVQCFKE------------RHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYESPEVKRLLEVNSQIPDDSF 256
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SINL4_ARATH (E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana GN=At1g66650 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.411e-18 Identity = 45/127 (35.43%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 32 LLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLK-HESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDHKVDMHNGSTF 409 +LECP C + + PI QC+NGH C C ++ RC C+ +G++RC A+EKV + + C YGC Y ++L+ HE C+F P +CP +C +G L+ H + HKV + ++F Sbjct: 83 VLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEKVIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPI--KDCNYIGFYKDLINHFRATHKVSPGDINSF 207
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SINL5_ARATH (E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana GN=At1g66660 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 29 ELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAH 364 ++L+CP C + PI+QCSNGH CS C +++ +C CR +G+IRC A+EKV + +PC +GC Y ++ HE C F +CP S C + L +H Sbjct: 82 DVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKLNKKCSFCRCNIGDIRCRAMEKVIEASIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPV--SNCNYVSSYSNLKSH 191
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Match: SINL2_ARATH (E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana GN=At1g66620 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18 Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 29 ELLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCMGIYPYYSKLKHESQCIFRPYNCPYAGSECTVMGDIPYLVAHLKDDH 379 +LL+CP+C +A+ PI QC NGH CS C ++ N+CP+C +GN R +E+V ++ + C +GC + Y +L HE C F CP C G L +H +H Sbjct: 40 DLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNKCPSCALPIGNFRSRIMERVVEAVMVTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCP--APNCNYSGVYKDLYSHFYVNH 154 The following BLAST results are available for this feature:
BLAST of BQ623877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623877 ID=BQ623877; Name=BQ623877; organism=Citrus sinensis; type=EST; length=695bpback to top |