BQ623889

Overview
NameBQ623889
Unique NameBQ623889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length676
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.870e-61
Identity = 115/197 (58.38%), Postives = 135/197 (68.53%), Query Frame = 1
Query:   10 SVERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELW 600
            +VER+K GF  FK E Y+K P  +  L  GQ+PKYMVFAC+DSRVCPS  L  +PGEAF +RN+AN+VP Y + K              LKV  IVVIGHS CGGIK L+S     ++S  F+EDWV+IG PAK KV TE    PF DQCT  EKEAVNVSL NLLTYPFV+EG+ N TL L GG+YDFV+G FE W
Sbjct:  126 AVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.456e-22
Identity = 68/195 (34.87%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   13 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTE---HGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGS 588
            ++ I DGF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +              L+VS+IV+ GHS CG +  + S      +    +  W++    A  +V+ E   H D P   +     +E V   L+NL T+P VR  L    +AL G  YD  +GS
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS--CQCMDHMPAVSHWLRYADSA--RVVNEARPHSDLP--SKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGS 188          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.456e-22
Identity = 68/195 (34.87%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   13 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTE---HGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGS 588
            ++ I DGF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +              L+VS+IV+ GHS CG +  + S      +    +  W++    A  +V+ E   H D P   +     +E V   L+NL T+P VR  L    +AL G  YD  +GS
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS--CQCMDHMPAVSHWLRYADSA--RVVNEARPHSDLP--SKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGS 188          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.291e-20
Identity = 55/191 (28.80%), Postives = 86/191 (45.03%), Query Frame = 1
Query:   13 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNG 585
            + ++ +G  HF+   Y  +  L+ + AKGQ P+ +   CSDSR+ P+ +     GE FV+RN  N++PP+                  L + ++VV GHS CG +KGL+            + DW++     +  VL  +      D       E V   + NL TYP VR  L    L + G  Y+  +G
Sbjct:    1 MRKLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPFGAANGGEGASIEYAIAA-LNIEHVVVCGHSHCGAMKGLLKLN-QLQEDMPLVYDWLQHAQATRRLVLDNYSGYETDDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEVESG 189          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori J99 GN=cynT PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19
Identity = 53/188 (28.19%), Postives = 91/188 (48.40%), Query Frame = 1
Query:   31 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXL-HLKVSNIVVIGHSACGGIKGLMSFPFDGNNS-TDFIEDWVKIGIPAKSKVLTE-HGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNG 585
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   QPGE +V+RN+ N++PP    K            + H+ V N+++ GHS CG    +     +   + T +I +W++   P K ++         F  +    E+    + L+NLL+Y F++E ++N  L + G +Y    G
Sbjct:    6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWHYIIETG 193          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CYNT_SYNY3 (Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803) GN=icfA PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.027e-18
Identity = 55/191 (28.80%), Postives = 87/191 (45.55%), Query Frame = 1
Query:   13 VERIKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNG 585
            ++R+ +G   F+   +  +  L+ +L+ GQ P+ +   CSDSRV P+ +   + G+ FV+RN  NI+PPY                + L+++ I+V GHS CG +KGL+            + DW+K     +  VL  +      D       E +   L NL TYP +   L    L+L G  Y    G
Sbjct:    1 MQRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKLN-SLQEKLPLVYDWLKHTEATRRLVLDNYSHLEGEDLIEVAVAENILTQLKNLQTYPAIHSRLHRGDLSLHGWIYRIEEG 189          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.304e-17
Identity = 61/191 (31.94%), Postives = 87/191 (45.55%), Query Frame = 1
Query:   22 IKDGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFPFDGNNSTDFIEDWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFE 594
            I DGF+ F+R+ Y     L+  LA  Q+PK +  ACSDSRV P  +   +PGE FV+RN  NIVP Y                + L V +IVV GHS CG +  + S      +    +  W+     A++ + + H       +     +  V   L+NL T+P V   L    L L G  YD  +G  +
Sbjct:    4 IIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYGPQPGGVSASVEYAVAV-LGVGDIVVCGHSDCGAMGAIASCAC--LDQLPAVAGWLHHAEAARA-MNSAHEHASEAARLDALVRHNVIAQLANLRTHPCVARALEQGRLNLHGWVYDIESGRID 190          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CYNT_HELPY (Carbonic anhydrase OS=Helicobacter pylori GN=cynT PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.063e-15
Identity = 52/189 (27.51%), Postives = 86/189 (45.50%), Query Frame = 1
Query:   31 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXL-HLKVSNIVVIGHSACGGIKGLMSFPFDGNN--STDFIEDWVKIGIPAKSKVLTE-HGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNG 585
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   +PGE +V+ N+ N+ PP    K            + H+ V N+++ GHS CG   G +    D      T +I +W++   P K ++         F  +    E+    + L+NLL+Y F++E      L + G +Y    G
Sbjct:    6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGAC-GSVHLIHDETTKAKTPYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQEKASKNELKIFGWHYIIETG 193          
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Match: CAN_EMENI (Carbonic anhydrase OS=Emericella nidulans GN=AN1805 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.299e-13
Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 1
Query:   67 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMS 342
            +P  +++LA GQSP+Y+   CSDSRV  + ++    GE FV RN+AN+VP  D +              HLKV +IVV GH  CGG++  ++
Sbjct:   36 DPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTIDLSSMSVINYAVG----HLKVKHIVVCGHYNCGGVQAALT 123          
The following BLAST results are available for this feature:
BLAST of BQ623889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CAHC_HORVU4.870e-6158.38Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CYNT_ECOLI4.456e-2234.87Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO574.456e-2234.87Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_SYNE79.291e-2028.80Carbonic anhydrase OS=Synechococcus elongatus (str... [more]
CYNT_HELPJ2.703e-1928.19Carbonic anhydrase OS=Helicobacter pylori J99 GN=c... [more]
CYNT_SYNY31.027e-1828.80Carbonic anhydrase OS=Synechocystis sp. (strain PC... [more]
CYNT_PSEAE3.304e-1731.94Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CYNT_HELPY1.063e-1527.51Carbonic anhydrase OS=Helicobacter pylori GN=cynT ... [more]
CAN_EMENI1.299e-1340.22Carbonic anhydrase OS=Emericella nidulans GN=AN180... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00969 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00969 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623889 ID=BQ623889; Name=BQ623889; organism=Citrus sinensis; type=EST; length=676bp
GCATTTGATTCCGTGGAGAGGATCAAAGACGGCTTCATTCACTTCAAGAG
AGAAAAATACGAGAAAAATCCAGCTCTGTACTCTGAGCTTGCCAAAGGCC
AAAGCCCGAAGTATATGGTATTTGCCTGCTCAGACTCCAGGGTTTGCCCG
TCCCATGTGTTGGATTTTCAACCTGGGGAAGCTTTCGTGGTTCGCAATGT
TGCTAACATTGTTCCACCCTATGACCAGACTAAGTATGCTGGAGTTGGAG
CTGCTGTCGAGTATGCAGTTTTGCATCTCAAGGTTTCAAACATTGTGGTT
ATTGGGCACAGCGCCTGTGGCGGCATCAAAGGACTCATGTCTTTCCCATT
TGATGGAAACAACTCCACCGATTTCATTGAAGACTGGGTGAAAATTGGCA
TCCCTGCCAAGTCTAAGGTGTTAACAGAGCATGGTGACAAGCCTTTTGGA
GACCAATGCACATACTGTGAAAAGGAGGCGGTGAATGTGTCCCTCAGTAA
TCTGCTAACGTATCCATTTGTGAGAGAAGGCTTGGTGAACAAAACTCTGG
CACTCAAGGGTGGTTACTATGATTTCGTTAATGGATCATTCGAGCTCTGG
GGTCTCGACTTTGGCCTTCTCCTCCACTCTGCGTATGAACATCACCGTTA
TATGATATCAGTGACCTGGGGTTTGT
back to top