BQ623899

Overview
NameBQ623899
Unique NameBQ623899
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length562
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 2.081e-18
Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLP 373
            ITFP E D+  + +  DIVFVL+ K H  FKR G D+     +SL EALCG    +  LDGR + +  +  +V++P   + +  EG+P+ + P  RG L I F V FPE +      +LE VLP
Sbjct:  218 ITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK--DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP 339          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.906e-18
Identity = 45/148 (30.41%), Postives = 80/148 (54.05%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVN 445
            I   G+  E P    GD++  +++K +  FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  260 IMLQGQGSEYPGVPPGDVIITIREKPNVNFKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DJB13_MOUSE (DnaJ homolog subfamily B member 13 OS=Mus musculus GN=Dnajb13 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.349e-17
Identity = 44/123 (35.77%), Postives = 72/123 (58.54%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVL 370
            ITF  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     ++V P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  194 ITFEKEGDQGPNIIPADIIFIVKEKLHPRFRREHDNLFFVYPIPLGKALTCCTVEVKTLDDR--LLNIPINDIVHPKYFKIVPGEGMPLPENPSKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DJB13_HUMAN (DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.300e-17
Identity = 43/123 (34.96%), Postives = 72/123 (58.54%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLETVL 370
            ITF  E D+ P+ +  DI+F++++K HP+F+R+ D+LF  + + L +AL      +  LD R  L+     +++ P  FK +  EGMP+ + P  +G L+I F + FP  L+P + +ML   L
Sbjct:  194 ITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIPLGKALTCCTVEVRTLDDR--LLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQFPTRLTPQKKQMLRQAL 314          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: PSI1_SCHPO (Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 3.924e-17
Identity = 52/119 (43.70%), Postives = 65/119 (54.62%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKS----QPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQ 346
            I F GE DE PD    DI FVL +K HP F R GDDL ++  LSL EAL GF   I+ +DG++L + S    QPG  +    F      GMP+ + P  RG + I   V FP  L+P Q
Sbjct:  260 IKFAGEGDEKPDGTVQDIQFVLAEKPHPVFTRSGDDLRMQVELSLKEALLGFSKQISTIDGKKLKVSSSLPTQPGYEITYPGF------GMPLPKNPSQRGNMIIECKVKFPTELTPAQ 372          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: XDJ1_SCHPO (DnaJ protein homolog xdj1 OS=Schizosaccharomyces pombe GN=xdj1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15
Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 2
Query:   14 GEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGF-QFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES--LSPDQCKMLETVLPPRTSVQLTD 400
            G ADEA     GD++  L QK HP F+R GDDL  +  +SL EAL GF + ++T LDGR L      G+++ P     I  EGM    +  +RG LY+   ++FP+   +   + ++L  +LP    V + D
Sbjct:  240 GMADEAYGITPGDVILQLHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTTLDGRGLEYVQPIGKILHPGDCLIIPGEGMYKDSKTDLRGDLYLEVDIEFPKDGLIGTTEIEILRDILPSIPKVSVMD 371          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 2
Query:    8 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPES-LSPDQCKMLETVLPPRT 382
            F GE +   +   GD+ F ++ ++HP+F+RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F V+FP++ LS +Q   +  +L   T
Sbjct:  223 FHGEGEPHIEGDPGDLKFKIRIQKHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGH--IVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEILQQNT 346          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 48/122 (39.34%), Postives = 66/122 (54.10%), Query Frame = 2
Query:    2 ITFPGEADEAPDTVTGDIV-FVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQL-LIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCKMLE 361
            IT+  + D  P T     + FV+Q+K HP FKR GDDL     LS  E+L GF   I  +DGR L L + QP   V+P Q      +GMP  + P  RG L + + VD+P SL+  Q + ++
Sbjct:  231 ITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQP---VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 349          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    8 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 352
            F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    8 FPGEADEAPDTVTGDIVFVLQQKEHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSVDFPESLSPDQCK 352
            F GE +   D   GD+ F ++  +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F VDFP+    ++ +
Sbjct:  224 FIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAR 336          
The following BLAST results are available for this feature:
BLAST of BQ623899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
DNJB1_BOVIN2.081e-1840.32DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNJA1_DICDI7.906e-1830.41DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DJB13_MOUSE1.349e-1735.77DnaJ homolog subfamily B member 13 OS=Mus musculus... [more]
DJB13_HUMAN2.300e-1734.96DnaJ homolog subfamily B member 13 OS=Homo sapiens... [more]
PSI1_SCHPO3.924e-1743.70Protein psi1 OS=Schizosaccharomyces pombe GN=psi1 ... [more]
XDJ1_SCHPO1.649e-1536.36DnaJ protein homolog xdj1 OS=Schizosaccharomyces p... [more]
DNJ20_CAEEL2.153e-1537.30DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
SIS1_YEAST8.181e-1539.34Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DJB11_PONAB3.109e-1435.65DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN3.109e-1435.65DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00979 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00979 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623899 ID=BQ623899; Name=BQ623899; organism=Citrus sinensis; type=EST; length=562bp
GATTACGTTCCCTGGAGAAGCTGATGAAGCGCCCGACACTGTCACAGGTG
ACATTGTATTTGTTCTACAACAGAAAGAGCACCCGAAATTTAAGCGAAAG
GGTGATGACCTATTTGTTGAGCACACCCTGTCACTGACAGAAGCTCTCTG
TGGCTTTCAATTTGTAATAACTCATTTGGATGGCCGGCAACTCCTCATCA
AATCCCAGCCTGGGGAAGTAGTCAAGCCGGACCAATTCAAGGCCATAAAT
GATGAAGGAATGCCTATGTATCAGAGGCCATTTATGAGGGGCAAACTGTA
CATTCATTTCAGTGTTGACTTCCCTGAGTCACTGAGCCCAGACCAGTGCA
AGATGCTGGAGACCGTACTACCTCCAAGGACCTCAGTCCAGCTCACCGAT
ATGGAACTGGATGAGTGTGAAGAAACAACCCTGCATGATGTGAACATTGA
GGAGGAAATGCGAAGGAAGCAACAAGCAGCTCAGGAGGCATACGATGAAG
ATGACGATATGCAAGGTGGTGCCCAGAGAGTGCAGTGTGCTCAGCAGTGA
TGATGTGAAGAA
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