BQ623900

Overview
NameBQ623900
Unique NameBQ623900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8932 contig Csv1_Contig8932:104..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: HITA_NEIGO (Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.953e-22
Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 1
Query:   73 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLG 378
            IF KI  KEIP++ VYED +++ F+DI+P AP H+L+IPKV      L+ A   H  +LG+++     +AK  GL DGF+ +IN G  GGQ VFH+H+H++G
Sbjct:    5 IFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPKVH--FDSLAHAAPEHQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHIMG 104          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: YHIT_BUCBP (Uncharacterized HIT-like protein bbp_327 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=bbp_327 PE=4 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.117e-19
Identity = 45/108 (41.67%), Postives = 75/108 (69.44%), Query Frame = 1
Query:   73 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLE-DGFRIVINDGPNGGQSVFHIHVHLLGGRQMN 393
            IF KII   IPSK++Y+D ++ AF DI+P AP HIL++P +   +  L++  E +  ILG +LY +  +AK+  ++ +G+R++IN   +G Q + H+H+HLLGG+++N
Sbjct:    5 IFQKIIKGIIPSKIIYQDKEITAFHDINPIAPIHILVVPNLL--IKSLNEINENNKHILGNMLYISIKIAKKFKIDKNGYRLIINCNQHGRQEIQHLHLHLLGGKKLN 110          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: Y664_CHLMU (Uncharacterized HIT-like protein TC_0664 OS=Chlamydia muridarum GN=TC_0664 PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.215e-18
Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 1
Query:   19 MASENEAAVAAVPSDSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGG 381
            M    E  V        TIF++II   +    V+ED+  +  +D  PQAP H+LIIPK    +  L   +     +L       +L+A+  G+E+G+R+VIN+G  GGQSVFH+H+HLLGG
Sbjct:    1 MRRSTEFGVKTAGGSMTTIFERIIEGAVECDKVFEDENFIVIKDKFPQAPVHLLIIPKKH--IEKLQDMQSDDFSLLSEAGKIIQLMARDFGIENGYRVVINNGLEGGQSVFHLHIHLLGG 119          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: YHIT_BUCAI (Uncharacterized HIT-like protein BU357 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=BU357 PE=4 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.811e-18
Identity = 43/108 (39.81%), Postives = 73/108 (67.59%), Query Frame = 1
Query:   70 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 390
            +IF  II ++IP+ +VY+D K+ AF DI P+AP HILIIP     ++  +   +++  I+  + Y A  +AKQ+ + ++G+RI+IN    GGQ + ++H+HLLGG+++
Sbjct:    5 SIFKNIIQRKIPANIVYQDKKITAFEDIKPKAPVHILIIPNF--FISSSNDINKKNKWIMSHMFYIAVKIAKQKKINQEGYRIIINCNEYGGQEINYLHMHLLGGKKL 110          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: YHIT_BUCAP (Uncharacterized HIT-like protein BUsg_345 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=BUsg_345 PE=4 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.517e-17
Identity = 43/107 (40.19%), Postives = 70/107 (65.42%), Query Frame = 1
Query:   73 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGL-EDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 390
            IF KII +E  + ++Y+D  V AF DI P+AP HI++IP +   +  L+   +++  I   +LY A  +AK + + EDG++IV+N   NGGQ + ++H+HLLGG ++
Sbjct:    7 IFQKIIKRETSTHIIYQDKIVTAFEDIAPKAPIHIIVIPNI--FIKTLNDINQKNKNIFAHMLYIAVKIAKNKKISEDGYKIVMNCNKNGGQEINYLHMHLLGGEKL 111          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: YHIT_CHLTR (Uncharacterized HIT-like protein CT_385 OS=Chlamydia trachomatis GN=CT_385 PE=4 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 1
Query:   70 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGG 381
            TIF++II   +    V+ED+  +  +D  PQAP H+LIIPK    +  L   +     +L       +L+A+  G+E+G+R+V+N+G  GGQSVFH+H+HLLGG
Sbjct:    3 TIFERIIEGAVECDKVFEDENFIVIKDKFPQAPVHLLIIPKKH--IEKLQDIQGDDFLLLAEAGKIIQLMARNFGIENGYRVVVNNGLEGGQSVFHLHIHLLGG 104          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: YHIT_RICPR (Uncharacterized HIT-like protein RP317 OS=Rickettsia prowazekii GN=RP317 PE=4 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.738e-16
Identity = 41/109 (37.61%), Postives = 69/109 (63.30%), Query Frame = 1
Query:   73 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVK--DGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLED-GFRIVINDGPNGGQSVFHIHVHLLGGRQM 390
            +F KII K +P++++YED ++LAF+DI P AP HI++IPK +  D    +SKA     + +         +A + GL+  G+R++ N G   GQ++FH H H++GG+++
Sbjct:    7 VFAKIITKNLPAEIIYEDKQILAFKDIAPIAPVHIIVIPKNEYIDYTDFISKAS---IDEIKHFFSKIADIANEAGLDKVGYRLITNKGEKSGQTIFHFHFHIIGGKKL 112          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: YHIT_CHLPN (HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 OS=Chlamydia pneumoniae GN=CPn_0488 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15
Identity = 43/110 (39.09%), Postives = 70/110 (63.64%), Query Frame = 1
Query:   70 TIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLV---AKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 390
            T+F +II+  I  + V+E++  +A +D  PQAP H+LIIPK       + + ++   + +  +    K+V   A + G+ DG+R+VIN+G  GGQ+VFH+H+HLLGGR +
Sbjct:    2 TVFKQIIDGLIDCEKVFENENFIAIKDRFPQAPVHLLIIPKKP-----IPRFQDIPGDEMILMAEAGKIVQELAAEFGIADGYRVVINNGAEGGQAVFHLHIHLLGGRPL 106          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: YHIT_AZOBR (Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region OS=Azospirillum brasilense PE=4 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14
Identity = 42/110 (38.18%), Postives = 58/110 (52.73%), Query Frame = 1
Query:   61 DSPTIFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPKVKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLLGGRQM 390
            D   +F +I+  EIP K V E +  LAF DI+PQAPTHIL+IPK          A     EI G      ++       E G+RI+ N G +  Q V H+H+H+  GR++
Sbjct:    6 DPNNVFARILRGEIPCKKVLETEHALAFHDINPQAPTHILVIPKGAYVDMDDFSARATEAEIAGLFRAVGEVARGAGAAEPGYRILSNCGEDANQEVPHLHIHVFAGRRL 115          
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Match: Y866_METJA (Uncharacterized HIT-like protein MJ0866 OS=Methanocaldococcus jannaschii GN=MJ0866 PE=4 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 8.616e-13
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 1
Query:   73 IFDKIINKEIPSKVVYEDDKVLAFRDIDPQAPTHILIIPK---------VKDGLTGLSKAEERHCEILGRLLYTAKLVAKQEGLEDGFRIVINDGPNGGQSVFHIHVHLL 375
            IF KIIN EIP+KVVYED+ VLAF DI+P+   H L++PK           D L    K  ++  E+L +L +            DG+ IV N+G   GQ V H+H H++
Sbjct:    3 IFCKIINGEIPAKVVYEDEHVLAFLDINPRNKGHTLVVPKKHYERFDEMPDDELCNFIKGVKKTVEVLKKLGF------------DGYNIVNNNGRVAGQEVNHVHFHII 100          
The following BLAST results are available for this feature:
BLAST of BQ623900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
HITA_NEIGO5.953e-2247.06Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4... [more]
YHIT_BUCBP2.117e-1941.67Uncharacterized HIT-like protein bbp_327 OS=Buchne... [more]
Y664_CHLMU5.215e-1838.84Uncharacterized HIT-like protein TC_0664 OS=Chlamy... [more]
YHIT_BUCAI6.811e-1839.81Uncharacterized HIT-like protein BU357 OS=Buchnera... [more]
YHIT_BUCAP1.517e-1740.19Uncharacterized HIT-like protein BUsg_345 OS=Buchn... [more]
YHIT_CHLTR9.836e-1741.35Uncharacterized HIT-like protein CT_385 OS=Chlamyd... [more]
YHIT_RICPR3.738e-1637.61Uncharacterized HIT-like protein RP317 OS=Ricketts... [more]
YHIT_CHLPN1.855e-1539.09HIT-like protein CPn_0488/CP_0266/CPj0488/CpB0508 ... [more]
YHIT_AZOBR2.678e-1438.18Uncharacterized 13.2 kDa HIT-like protein in hisE ... [more]
Y866_METJA8.616e-1340.00Uncharacterized HIT-like protein MJ0866 OS=Methano... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00980 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00980 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623900 ID=BQ623900; Name=BQ623900; organism=Citrus sinensis; type=EST; length=596bp
CATTTGTCTGCCGTCGTCATGGCTTCAGAGAACGAGGCTGCTGTTGCAGC
CGTTCCTTCTGATTCGCCTACCATATTTGACAAAATAATTAACAAAGAAA
TCCCATCTAAAGTTGTTTATGAGGATGATAAGGTCTTAGCCTTTAGGGAC
ATAGATCCCCAAGCTCCTACACACATTCTAATTATTCCCAAAGTGAAGGA
TGGCTTGACTGGACTTTCAAAGGCCGAGGAAAGGCATTGCGAAATTCTTG
GCCGCCTTCTTTACACTGCTAAGCTTGTTGCTAAACAGGAAGGACTAGAA
GACGGCTTTAGGATTGTGATTAATGATGGGCCAAATGGAGGTCAATCAGT
TTTTCACATCCACGTCCACCTCCTAGGAGGACGACAAATGAACTGGCCCC
CGGGCTAAGATGAAGTATTTTGGGTGCCAGATTCTCTTATGAAAAAATGA
TTATGCCCTTTGTACTTTAATATGCATCAAGCTGCATCGAGCTTCAAATA
ACAAACTAATTGGTGGCTGCTTTGAGCCACATTATTTGATATGATGTGAA
ATGACATTGTGCTGAAAGGAGAAAAAGACCTTCAATAATAAGGGTG
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