BQ623909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.064e-13 Identity = 55/161 (34.16%), Postives = 80/161 (49.69%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEV-VAVKVIRNKQTGQ----------IEGYGFIEFISRAGAERVLQTFNGTPMPN-GEQNFRLNWASFGAGEKRDDTPDH------TIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQ 429 GDL D+ + +A GE + V+++ N +GY F++F S A L NG +PN + +LNWA+ + + +IFVGDLA +VT+ L E F RY ST AK+V D++TG +KGYGFV+F + EQ Sbjct: 59 GDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGPKNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQ 218
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.007e-12 Identity = 49/145 (33.79%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKR---DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 G+L Y +D L F G V +VI N++T + G+GF+ + AE+ ++ NG M +G Q A G+ E+ D P ++VG+L DV L++ F + + A+VV DR TGR++G+GFV ESE Sbjct: 60 GNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDM-DGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLF-SEHGKVVSARVVSDRETGRSRGFGFVTMSSESE 202
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 39/136 (28.68%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + L + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 78 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIE 206
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV2_RAT (ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 39/136 (28.68%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + L + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGISRGVGFIRFDKRIE 178
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 39/136 (28.68%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + L + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGISRGVGFIRFDKRIE 178
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 39/136 (28.68%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + L + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGISRGVGFIRFDKRIE 178
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ELAV2_HUMAN (ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 39/136 (28.68%), Postives = 74/136 (54.41%), Query Frame = 1 Query: 19 MDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 M + L + F GE+ + K++R+K TGQ GYGF+ +I AE+ + T NG + + ++++A + R D ++V L +T L++ F ++Y +++++D++TG ++G GF+RF E Sbjct: 50 MTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMTQKELEQLF-SQYGRIITSRILVDQVTGISRGVGFIRFDKRIE 178
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11 Identity = 53/158 (33.54%), Postives = 75/158 (47.47%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG------------TPMPNGEQN--FRLNWASFGAGEKRDDTPD--HTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 G+L + D L F G V V+VI +K TG+ G+GF+ S+ E Q FNG P P +N FR N +SF G + + D + ++VG+LA V D ET + AKVV DR +GR++G+GFV + E Sbjct: 92 GNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFREN-SSFRGGSRGGGSFDSSNRVYVGNLAWGV-DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEE 247
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: PUB1_YEAST (Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae GN=PUB1 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 1.699e-11 Identity = 45/142 (31.69%), Postives = 68/142 (47.89%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 G+L + E L F G + +K++ +K + Y F+E+ A LQT NG + N ++NWA DDT +FVGDL +V D L+ F+ +PS V+ D TG ++GYGFV F + + Sbjct: 80 GNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVN-YAFVEYHQSHDANIALQTLNGKQIENNI--VKINWAFQSQQSSSDDT--FNLFVGDLNVNVDDETLRNAFKD-FPSYLSGHVMWDMQTGSSRGYGFVSFTSQDD 215
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11 Identity = 49/154 (31.82%), Postives = 68/154 (44.16%), Query Frame = 1 Query: 1 GDLQYWMDETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG------------TPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESE 426 G+L + D L F G V V+VI +K TG+ G+GF+ S+ E Q FNG P P +N S G G + ++VG+LA V D ET + AKVV DR +GR++G+GFV + E Sbjct: 92 GNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGG---SFDSSNRVYVGNLAWGV-DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEE 241 The following BLAST results are available for this feature:
BLAST of BQ623909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623909 ID=BQ623909; Name=BQ623909; organism=Citrus sinensis; type=EST; length=439bpback to top |